RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ACOT12Q8WYK0 555 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 CNOT9Q92600 299 aaKnown RBP4.32□□□□□ -1.72
USP48-202ENST00000374730 ITFG2Q969R8 447 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 EFHD2Q96C19 240 aaPredicted RBP4.32□□□□□ -1.72
USP48-202ENST00000374730 BPIFA2Q96DR5 249 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 RNF125Q96EQ8 232 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 VSTM2LQ96N03 204 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 AGAP4Q96P64 663 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 CCNL2Q96S94 520 aaPredicted RBP4.32□□□□□ -1.72
USP48-202ENST00000374730 SECISBP2Q96T21 854 aaKnown RBP4.32□□□□□ -1.72
USP48-202ENST00000374730 SOSTQ9BQB4 213 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 PELOQ9BRX2 385 aaKnown RBP4.32□□□□□ -1.72
USP48-202ENST00000374730 KCNN2Q9H2S1 579 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 FOLH1BQ9HBA9 442 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 TMEM27Q9HBJ8 222 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 FAM60AQ9NP50 221 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 ABCB9Q9NP78 766 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 INIPQ9NRY2 104 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 C20orf141Q9NUB4 165 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 HAO2Q9NYQ3 351 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 WSB2Q9NYS7 404 aaPredicted RBP4.32□□□□□ -1.72
USP48-202ENST00000374730 MSRB1Q9NZV6 116 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 SIGLEC7Q9Y286 467 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 MRPS33Q9Y291 106 aaKnown RBP4.32□□□□□ -1.72
USP48-202ENST00000374730 CSNK1G3Q9Y6M4 447 aa4.32□□□□□ -1.72
USP48-202ENST00000374730 EXPH5Q8NEV8 1989 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 PCDH15Q96QU1 1955 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 TRIOO75962 3097 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 A0A0G2JK05 382 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 A0A1W2PQ09 198 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 A0A1W2PQL4 384 aaPredicted RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 FABP12A6NFH5 140 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ANKRD61A6NGH8 418 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 RIIAD1A6NNX1 92 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 EFCAB7A8K855 629 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 C12orf71A8MTZ7 269 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 C2CD4DB7Z1M9 353 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 PRR23D1E9PI22 279 aaPredicted RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 CASKO14936 926 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 DHHO43323 396 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 RNF13O43567 381 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 HCRTR1O43613 425 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ATP6V1G1O75348 118 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 TSPAN9O75954 239 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 SLC2A10O95528 541 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 IGF2P01344 180 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 IFNGP01579 166 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 CLEC3BP05452 202 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 CSF3P09919 207 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 SBK2P0C263 348 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 GKN3PP0CG01 181 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 PRR23D2P0DMB1 279 aaPredicted RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 SAGP10523 405 aaPredicted RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 PEPDP12955 493 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ZNF3P17036 446 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 CELP19835 753 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 AZGP1P25311 298 aaKnown RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 SLC6A6P31641 620 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ATP6V1E1P36543 226 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ACAA2P42765 397 aaKnown RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 GABRA4P48169 554 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 RFX2P48378 723 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 TGM4P49221 684 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 TMED10P49755 219 aaKnown RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 GPR143P51810 404 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 TAS2R43P59537 309 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 FUT7Q11130 342 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 BIKQ13323 160 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 CBFBQ13951 182 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 GGTLC2Q14390 218 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ELOCQ15369 112 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 INPP5JQ15735 1006 aaPredicted RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 ISXQ2M1V0 245 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 LRIT3Q3SXY7 679 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 CCDC92Q53HC0 331 aaPredicted RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 PDZK1Q5T2W1 519 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 LCN1P1Q5VSP4 162 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ZNF544Q6NX49 715 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ULK3Q6PHR2 472 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ZNF474Q6S9Z5 364 aaPredicted RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 FAM131AQ6UXB0 335 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 NPSR1Q6W5P4 371 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 DGAT2L6Q6ZPD8 337 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 RTL4Q6ZR62 310 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 SYT13Q7L8C5 426 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 NRARPQ7Z6K4 114 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 C17orf82Q86X59 251 aaPredicted RBP4.31□□□□□ -1.72
USP48-202ENST00000374730 MARCH9Q86YJ5 346 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 RAB43Q86YS6 212 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 KLBQ86Z14 1044 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 SFTPA2Q8IWL1 248 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 ZNF440Q8IYI8 595 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 UBQLNLQ8IYU4 475 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 RDH10Q8IZV5 341 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 SLC37A3Q8NCC5 494 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 FAM71CQ8NEG0 241 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 OR51G2Q8NGK0 314 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 OR13C2Q8NGS9 318 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 OR9A4Q8NGU2 314 aa4.31□□□□□ -1.72
USP48-202ENST00000374730 NEIL3Q8TAT5 605 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms