RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 IGHMP01871 453 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 C4BPBP20851 252 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 MPLP40238 635 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 P2RX1P51575 399 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 GPLD1P80108 840 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 TOMM20Q15388 145 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 STPG1Q5TH74 334 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 DNM1P46Q6ZS02 220 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 MISPQ8IVT2 679 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 OR6S1Q8NH40 331 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 OTOSQ8NHW6 89 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 STK35Q8TDR2 534 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 METTL21AQ8WXB1 218 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 TSSK2Q96PF2 358 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 OR8B4Q96RC9 309 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 GPN1Q9HCN4 374 aaPredicted RBP12.6□□□□□ -0.39
HMGCL-203ENST00000374490 TAS2R10Q9NYW0 307 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 SUSD2Q9UGT4 822 aa12.6□□□□□ -0.39
HMGCL-203ENST00000374490 ELF5Q9UKW6 265 aaPredicted RBP12.6□□□□□ -0.39
HMGCL-203ENST00000374490 NOS1APO75052 506 aaPredicted RBP12.59□□□□□ -0.39
HMGCL-203ENST00000374490 GLSO94925 669 aaPredicted RBP12.59□□□□□ -0.39
HMGCL-203ENST00000374490 IL5P05113 134 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 ITPKBP27987 946 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 SOX2P48431 317 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 ARRB1P49407 418 aaPredicted RBP12.59□□□□□ -0.39
HMGCL-203ENST00000374490 PER3P56645 1201 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 RPL27P61353 136 aaKnown RBP12.59□□□□□ -0.39
HMGCL-203ENST00000374490 ZBTB37Q5TC79 503 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 SLC18B1Q6NT16 456 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 TMPRSS12Q86WS5 348 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 KMT5CQ86Y97 462 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 PLXDC1Q8IUK5 500 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 ANGPTL6Q8NI99 470 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 THEM6Q8WUY1 208 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 ZC3H10Q96K80 434 aaKnown RBP12.59□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF436Q9C0F3 470 aaPredicted RBP12.59□□□□□ -0.39
HMGCL-203ENST00000374490 WWTR1Q9GZV5 400 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 SYT4Q9H2B2 425 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF304Q9HCX3 659 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 DLL4Q9NR61 685 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 SLC17A5Q9NRA2 495 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 VSX1Q9NZR4 365 aaPredicted RBP12.59□□□□□ -0.39
HMGCL-203ENST00000374490 SCN2AQ99250 2005 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 SPTBN2O15020 2390 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 C4orf47A7E2U8 309 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 A8MVM7 634 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 SNRPGP15A8MWD9 76 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 H7C1C5 153 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 DCTN6O00399 190 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 DUX1O43812 170 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 CPN1P15169 458 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 ADRA2CP18825 462 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 DNASE1P24855 282 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 CDK2P24941 298 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 OR1D4P47884 311 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 MECP2P51608 486 aaKnown RBP12.59□□□□□ -0.39
HMGCL-203ENST00000374490 NR0B1P51843 470 aaKnown RBP12.59□□□□□ -0.39
HMGCL-203ENST00000374490 LCN6P62502 163 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 PLA2G2CQ5R387 149 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 PMS2CLQ68D20 193 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 DPY19L4Q7Z388 723 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 GRINAQ7Z429 371 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 C9orf40Q8IXQ3 194 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 PIAS4Q8N2W9 510 aaPredicted RBP12.59□□□□□ -0.39
HMGCL-203ENST00000374490 D2HGDHQ8N465 521 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF454Q8N9F8 522 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 OR11G2Q8NGC1 345 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 OR8H1Q8NGG4 311 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 OR1N1Q8NGS0 311 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF519Q8TB69 540 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 NXPE2Q96DL1 559 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 OMA1Q96E52 524 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 TXNIPQ9H3M7 391 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 TAS2R5Q9NYW4 299 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 SEMA5BQ9P283 1151 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 SLC23A1Q9UHI7 598 aa12.59□□□□□ -0.39
HMGCL-203ENST00000374490 TPRP12270 2363 aaKnown RBP12.58□□□□□ -0.4
HMGCL-203ENST00000374490 TMED7-TICAM2A0A0A6YYA0 188 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 PRSS37A4D1T9 235 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 XRCC3O43542 346 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 OR2T1O43869 369 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 SUSD5O60279 629 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 GMDSO60547 372 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 DXOO77932 396 aaKnown RBP12.58□□□□□ -0.4
HMGCL-203ENST00000374490 NDUFB6O95139 128 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 OR6A2O95222 327 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 AHSA1O95433 338 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 NUDT14O95848 222 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 CSF1P09603 554 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 CXCL3P19876 107 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 ROM1Q03395 351 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 SSBP1Q04837 148 aaKnown RBP12.58□□□□□ -0.4
HMGCL-203ENST00000374490 SLC17A1Q14916 467 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 CLPPQ16740 277 aaPredicted RBP12.58□□□□□ -0.4
HMGCL-203ENST00000374490 SFRP4Q6FHJ7 346 aaPredicted RBP12.58□□□□□ -0.4
HMGCL-203ENST00000374490 KCTD18Q6PI47 426 aaPredicted RBP12.58□□□□□ -0.4
HMGCL-203ENST00000374490 GLDNQ6ZMI3 551 aaPredicted RBP12.58□□□□□ -0.4
HMGCL-203ENST00000374490 PRSS42Q7Z5A4 293 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 MARCH3Q86UD3 253 aa12.58□□□□□ -0.4
HMGCL-203ENST00000374490 PM20D2Q8IYS1 436 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms