RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 NANSQ9NR45 359 aa11.74□□□□□ -0.53
CXCL12-202ENST00000374426 CORO2BQ9UQ03 480 aa11.74□□□□□ -0.53
CXCL12-202ENST00000374426 WIPI2Q9Y4P8 454 aa11.74□□□□□ -0.53
CXCL12-202ENST00000374426 ARHGAP32A7KAX9 2087 aa11.74□□□□□ -0.53
CXCL12-202ENST00000374426 CPSF4LA6NMK7 179 aaKnown RBP11.73□□□□□ -0.53
CXCL12-202ENST00000374426 EVPLLA8MZ36 301 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 POLR3GO15318 223 aaPredicted RBP11.73□□□□□ -0.53
CXCL12-202ENST00000374426 OPN1SWP03999 348 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 RAD52P43351 418 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 LIMS1P48059 325 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 IDH3AP50213 366 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 GLO1Q04760 184 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 HIST3H3Q16695 136 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 TBC1D28Q2M2D7 210 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 SLC36A2Q495M3 483 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 NRN1LQ496H8 165 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 ENTPD8Q5MY95 495 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 DLEU7Q6UYE1 221 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 USP51Q70EK9 711 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 SLC16A14Q7RTX9 510 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 DPPA2Q7Z7J5 298 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 PTOV1Q86YD1 416 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 RBM45Q8IUH3 476 aaKnown RBP11.73□□□□□ -0.53
CXCL12-202ENST00000374426 ICA1LQ8NDH6 482 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 OR4D11Q8NGI4 311 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 ADAMTS16Q8TE57 1224 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 MCHR2Q969V1 340 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 SLC6A7Q99884 636 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 ZNF426Q9BUY5 554 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 SUCNR1Q9BXA5 334 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 BCL2L14Q9BZR8 327 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.73□□□□□ -0.53
CXCL12-202ENST00000374426 ZNF229Q9UJW7 825 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 TRIM33Q9UPN9 1127 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 ANGPT4Q9Y264 503 aa11.73□□□□□ -0.53
CXCL12-202ENST00000374426 CLDN25C9JDP6 229 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 J3QLI3 93 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 M0QX08 132 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 KPNA4O00629 521 aaPredicted RBP11.72□□□□□ -0.53
CXCL12-202ENST00000374426 BCL10O95999 233 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 PTHP01270 115 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 IGHV3-13P01766 116 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 IGHG1P01857 330 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 MMP7P09237 267 aaPredicted RBP11.72□□□□□ -0.53
CXCL12-202ENST00000374426 ASAH2BP0C7U1 165 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 TEKQ02763 1124 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 TSTQ16762 297 aaKnown RBP11.72□□□□□ -0.53
CXCL12-202ENST00000374426 AWAT1Q58HT5 328 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 TMEM255AQ5JRV8 349 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 DCAF12L2Q5VW00 463 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 TTC33Q6PID6 262 aaPredicted RBP11.72□□□□□ -0.53
CXCL12-202ENST00000374426 ZDHHC22Q8N966 263 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 RBM15BQ8NDT2 890 aaKnown RBP11.72□□□□□ -0.53
CXCL12-202ENST00000374426 CPEB3Q8NE35 698 aaKnown RBP11.72□□□□□ -0.53
CXCL12-202ENST00000374426 OR1J2Q8NGS2 313 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 TLCD1Q96CP7 247 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 C7orf26Q96N11 449 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 ZNF347Q96SE7 839 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 SEPHS2Q99611 448 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 MRPL13Q9BYD1 178 aaKnown RBP11.72□□□□□ -0.53
CXCL12-202ENST00000374426 SAP30LQ9HAJ7 183 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 DECR2Q9NUI1 292 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 OPN4Q9UHM6 478 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 SLC7A7Q9UM01 511 aa11.72□□□□□ -0.53
CXCL12-202ENST00000374426 IQCMA0A1B0GVH7 501 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 TRAPPC13A5PLN9 417 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 TPD52L2O43399 206 aaKnown RBP11.71□□□□□ -0.53
CXCL12-202ENST00000374426 KCNAB3O43448 404 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 ERLIN1O75477 346 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 TGDSO95455 350 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 FSHBP01225 129 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 MAKP20794 623 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 CLRN1P58418 232 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 PLP2Q04941 152 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 HFEQ30201 348 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 AGKQ53H12 422 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 RUNDC3AQ59EK9 446 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 ZNF101Q8IZC7 436 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 LRRC18Q8N456 261 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 C11orf65Q8NCR3 313 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 NOXO1Q8NFA2 376 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 OR1J1Q8NGS3 322 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 VANGL1Q8TAA9 524 aaPredicted RBP11.71□□□□□ -0.53
CXCL12-202ENST00000374426 NANPQ8TBE9 248 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 SLC19A3Q9BZV2 496 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 LRMDAQ9H2I8 198 aa11.71□□□□□ -0.53
CXCL12-202ENST00000374426 MEPEQ9NQ76 525 aaPredicted RBP11.71□□□□□ -0.53
CXCL12-202ENST00000374426 BLOC1S5-TXNDC5H3BN57 136 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 IGHV1-46P01743 117 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 MT-ND5P03915 603 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 HIST1H2ABP04908 130 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 F13BP05160 661 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 UMPSP11172 480 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 CD247P20963 164 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 DRD4P21917 467 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 GATA3P23771 443 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 APLNRP35414 380 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 MPV17P39210 176 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 WNT5AP41221 380 aa11.7□□□□□ -0.54
CXCL12-202ENST00000374426 ZNF81P51508 661 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms