RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 NAA11Q9BSU3 229 aaPredicted RBP13.96□□□□□ -0.17
NIPAL3-204ENST00000374399 PCDHGB7Q9Y5F8 929 aa13.96□□□□□ -0.17
NIPAL3-204ENST00000374399 PIEZO1Q92508 2521 aa13.96□□□□□ -0.17
NIPAL3-204ENST00000374399 PRRC2CQ9Y520 2896 aaKnown RBP13.96□□□□□ -0.18
NIPAL3-204ENST00000374399 BSNQ9UPA5 3926 aa13.96□□□□□ -0.18
NIPAL3-204ENST00000374399 PHF3Q92576 2039 aaKnown RBP13.96□□□□□ -0.18
NIPAL3-204ENST00000374399 PNMA8CA0A1B0GUJ8 204 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 K7EM74 188 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 ZNF432O94892 652 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 ALOX5APP20292 161 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 CRABP1P29762 137 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 EIF2S3P41091 472 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 EIF1AXP47813 144 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 CLDN17P56750 224 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 RPS25P62851 125 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 BDH1Q02338 343 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 MEP1BQ16820 701 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 TP53I3Q53FA7 332 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 TMPRSS11AQ6ZMR5 421 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 VASH1Q7L8A9 365 aaPredicted RBP13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 SYS1Q8N2H4 156 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 SLC26A10Q8NG04 563 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 AMELYQ99218 206 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 DEFB127Q9H1M4 99 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 DKK4Q9UBT3 224 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 URB1O60287 2271 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 J3QLW9 94 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 SLC22A1O15245 554 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 NOL3O60936 208 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 ZNF19P17023 458 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 ATMQ13315 3056 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 SLC10A1Q14973 349 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 PHYHD1Q5SRE7 291 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 LRFN4Q6PJG9 635 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 SLC25A47Q6Q0C1 308 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 DPY19L4Q7Z388 723 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 TMEM123Q8N131 208 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 PELI1Q96FA3 418 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 OR2M2Q96R28 347 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 DCLRE1CQ96SD1 692 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 INTS14Q96SY0 518 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 CHCHD6Q9BRQ6 235 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 SF3B5Q9BWJ5 86 aaKnown RBP13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 SPRR3Q9UBC9 169 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 GRIP1Q9Y3R0 1128 aa13.95□□□□□ -0.18
NIPAL3-204ENST00000374399 CACNA1GO43497 2377 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 TRAV17A0A0B4J275 112 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 AKAP8O43823 692 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 IGHG1P01857 330 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 MT-ND5P03915 603 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 HSF2Q03933 536 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 LSAMPQ13449 338 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 CARD17Q5XLA6 110 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 PLXDC2Q6UX71 529 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 RPTNQ6XPR3 784 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 OR6N2Q8NGY6 317 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 OTOSQ8NHW6 89 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 NEIL3Q8TAT5 605 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 UFD1Q92890 307 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 ABTB1Q969K4 478 aaPredicted RBP13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 MCHR2Q969V1 340 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 ADAD1Q96M93 576 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 ST6GALNAC2Q9UJ37 374 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 KCNG2Q9UJ96 466 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 PCDHGA9Q9Y5G4 932 aaKnown RBP13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 FLVCR1Q9Y5Y0 555 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 CACNA1CQ13936 2221 aa13.94□□□□□ -0.18
NIPAL3-204ENST00000374399 PSMD9O00233 223 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 ZNF593O00488 134 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 CYTIPO60759 359 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 KHDRBS3O75525 346 aaKnown RBP13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 ABHD16AO95870 558 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 WNT11O96014 354 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 CELP19835 753 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 CENPAP49450 140 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 SRYQ05066 204 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 BCL2A1Q16548 175 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 PCK2Q16822 640 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 THEM4Q5T1C6 240 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 CD200R1LQ6Q8B3 271 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 DYNC2LI1Q8TCX1 351 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 NSMAFQ92636 917 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 TMEM54Q969K7 222 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 TMEM203Q969S6 136 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 CPNE4Q96A23 557 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 ZHX1-C8orf76Q96EF9 292 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 TSC22D3Q99576 134 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 TM9SF2Q99805 663 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 ACOXLQ9NUZ1 547 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 MRM2Q9UI43 246 aaKnown RBP13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 FOXD3Q9UJU5 478 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 STUB1Q9UNE7 303 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 LOC100506127A0A0U1RQW1 187 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 NPIPA2E9PIF3 369 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 ZNF670-ZNF695F2Z2N8 137 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 NPIPA3F8WFD2 350 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 SELENOPP49908 381 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 ZNF133P52736 654 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 BLVRAP53004 296 aa13.93□□□□□ -0.18
NIPAL3-204ENST00000374399 CLRN1P58418 232 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms