RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 SRA1Q9HD15 236 aaKnown RBP11.23□□□□□ -0.61
PRPF4-202ENST00000374199 B3GAT2Q9NPZ5 323 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 RABL2AQ9UBK7 228 aaPredicted RBP11.23□□□□□ -0.61
PRPF4-202ENST00000374199 KCNG2Q9UJ96 466 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 RABL2BQ9UNT1 228 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 FARSAQ9Y285 508 aaKnown RBP11.23□□□□□ -0.61
PRPF4-202ENST00000374199 IGKV1D-43A0A0B4J1Z2 117 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 CTDSPLO15194 276 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 IFNGR1P15260 489 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 ELK1P19419 428 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 OR10A3P58181 314 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 DNASE1L3Q13609 305 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 ASPHD2Q6ICH7 369 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 CNIH2Q6PI25 160 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 SLC25A47Q6Q0C1 308 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 SLC35D2Q76EJ3 337 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 TRIM63Q969Q1 353 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 ADAD1Q96M93 576 aaKnown RBP11.23□□□□□ -0.61
PRPF4-202ENST00000374199 PDCD1LG2Q9BQ51 273 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 CDCP1Q9H5V8 836 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 ABCB10Q9NRK6 738 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 SLCO1C1Q9NYB5 712 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 NPAP1Q9NZP6 1156 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 VDAC3Q9Y277 283 aa11.23□□□□□ -0.61
PRPF4-202ENST00000374199 PCDHGA9Q9Y5G4 932 aaKnown RBP11.23□□□□□ -0.61
PRPF4-202ENST00000374199 A0A087WV48 116 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 LRRC3CA6NJW4 275 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 FAM171A2A8MVW0 826 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 C11orf98E9PRG8 122 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 GMFGO60234 142 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 SRMP19623 302 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 RAB3BP20337 219 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 MYL9P24844 172 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 EDNRAP25101 427 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 GPR85P60893 370 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 SLC25A35Q3KQZ1 300 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 Q499Y3 187 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 ZNF468Q5VIY5 522 aaPredicted RBP11.22□□□□□ -0.61
PRPF4-202ENST00000374199 TIGD3Q6B0B8 471 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 IGF2-ASQ6U949 168 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 ESX1Q8N693 406 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 TXNDC15Q96J42 360 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 OXGR1Q96P68 337 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 OR14A2Q96R54 314 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 LAMP5Q9UJQ1 280 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 RHBDD3Q9Y3P4 386 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 GPR171O14626 319 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 PLA2G10O15496 165 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 ATF1P18846 271 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 FSTP19883 344 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 AGFG1P52594 562 aaKnown RBP11.22□□□□□ -0.61
PRPF4-202ENST00000374199 FOXK1P85037 733 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 GLO1Q04760 184 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 THEM4Q5T1C6 240 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 SLC22A10Q63ZE4 541 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 FAM166AQ6J272 317 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 DPY19L4Q7Z388 723 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 SNRNP27Q8WVK2 155 aaKnown RBP11.22□□□□□ -0.61
PRPF4-202ENST00000374199 THRSPQ92748 146 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 ADGRG7Q96K78 797 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 FAM210AQ96ND0 272 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 MRI1Q9BV20 369 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 PTGES2Q9H7Z7 377 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 ZNF318Q5VUA4 2279 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 FABP12A6NFH5 140 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 SHISA8B8ZZ34 492 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 AIPO00170 330 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 ZNF593O00488 134 aaPredicted RBP11.22□□□□□ -0.61
PRPF4-202ENST00000374199 SLC16A7O60669 478 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 GPANK1O95872 356 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 WNT11O96014 354 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 MT-CO3P00414 261 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 OR8G3PP0DMU2 310 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 IGFBP3P17936 291 aaPredicted RBP11.22□□□□□ -0.61
PRPF4-202ENST00000374199 NR4A2P43354 598 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 PSMD7P51665 324 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 TLE3Q04726 772 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 SF3A2Q15428 464 aaKnown RBP11.22□□□□□ -0.61
PRPF4-202ENST00000374199 ETFDHQ16134 617 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 HACD4Q5VWC8 232 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 SLC18B1Q6NT16 456 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 NOXO1Q8NFA2 376 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 OR52N5Q8NH56 324 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 RNF133Q8WVZ7 376 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 TMEM54Q969K7 222 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 ITPKCQ96DU7 683 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 TMEM9BQ9NQ34 198 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 CYB5R1Q9UHQ9 305 aa11.22□□□□□ -0.61
PRPF4-202ENST00000374199 GSTZ1O43708 216 aaPredicted RBP11.21□□□□□ -0.61
PRPF4-202ENST00000374199 CBR3O75828 277 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 KRT8P05787 483 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 EIF4EP06730 217 aaKnown RBP11.21□□□□□ -0.61
PRPF4-202ENST00000374199 TFPIP10646 304 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 DPP4P27487 766 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 PSMB10P40306 273 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 C10orf128Q5T292 105 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 POMZP3Q6PJE2 187 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 DNM1P34Q6PK57 102 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 TMPPEQ6ZT21 453 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 HDDC2Q7Z4H3 204 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms