RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 PHYHO14832 338 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 ACTL6AO96019 429 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 FMODQ06828 376 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 KCTD20Q7Z5Y7 419 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 MEIOBQ8N635 442 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 NDNFQ8TB73 568 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 ABTB1Q969K4 478 aaPredicted RBP23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 SSR3Q9UNL2 185 aa23.43■■□□□ 1.34
ATPAF1-202ENST00000371937 GPANK1O95872 356 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 ZNF708P17019 499 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 CRYBB2P43320 205 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 LSAMPQ13449 338 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 PLEKHG7Q6ZR37 379 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 USP43Q70EL4 1123 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 TRILQ7L0X0 811 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 DPY19L4Q7Z388 723 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 ZADH2Q8N4Q0 377 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 ZFP41Q8N8Y5 198 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 CENPOQ9BU64 300 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 KLHL9Q9P2J3 617 aa23.42■■□□□ 1.34
ATPAF1-202ENST00000371937 ZNF593O00488 134 aaPredicted RBP23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 GPX5O75715 221 aa23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 PTGS2P35354 604 aa23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 UGT2B10P36537 528 aa23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 GBX2P52951 348 aaPredicted RBP23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 CLDN18P56856 261 aa23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 TUBA1BP68363 451 aa23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 TP53I3Q53FA7 332 aa23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 TUBA1AQ71U36 451 aa23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 KBTBD8Q8NFY9 601 aa23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 OTOSQ8NHW6 89 aa23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 ZDHHC11Q9H8X9 412 aa23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 EXOSC4Q9NPD3 245 aaKnown RBP23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 MRPL22Q9NWU5 206 aaKnown RBP23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 PAQR5Q9NXK6 330 aaPredicted RBP23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 SF3B6Q9Y3B4 125 aaKnown RBP23.41■■□□□ 1.34
ATPAF1-202ENST00000371937 ALOX5APP20292 161 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 HIST3H3Q16695 136 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 IGFL3Q6UXB1 125 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 GLB1L2Q8IW92 636 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 TTTY10Q9BZA0 68 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 LDAHQ9H6V9 325 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 GNG8Q9UK08 70 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 PCDHGA9Q9Y5G4 932 aaKnown RBP23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 KIAA1549Q9HCM3 1950 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 TACSTD2P09758 323 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 CD53P19397 219 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 ENTPD1P49961 510 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 ADAM8P78325 824 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 SLC26A10Q8NG04 563 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 NEIL3Q8TAT5 605 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 TMEM203Q969S6 136 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 FOXN4Q96NZ1 517 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 COQ7Q99807 217 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 DCSTAMPQ9H295 470 aa23.4■■□□□ 1.34
ATPAF1-202ENST00000371937 HRGP04196 525 aa23.39■■□□□ 1.33
ATPAF1-202ENST00000371937 ZNF823P16415 610 aa23.39■■□□□ 1.33
ATPAF1-202ENST00000371937 EGR3Q06889 387 aa23.39■■□□□ 1.33
ATPAF1-202ENST00000371937 ZNF684Q5T5D7 378 aa23.39■■□□□ 1.33
ATPAF1-202ENST00000371937 CARD17Q5XLA6 110 aa23.39■■□□□ 1.33
ATPAF1-202ENST00000371937 ABLIM2Q6H8Q1 611 aa23.39■■□□□ 1.33
ATPAF1-202ENST00000371937 HAVCR2Q8TDQ0 301 aa23.39■■□□□ 1.33
ATPAF1-202ENST00000371937 ASB17Q8WXJ9 295 aa23.39■■□□□ 1.33
ATPAF1-202ENST00000371937 PELI1Q96FA3 418 aa23.39■■□□□ 1.33
ATPAF1-202ENST00000371937 DEFB127Q9H1M4 99 aa23.39■■□□□ 1.33
ATPAF1-202ENST00000371937 DCHS1Q96JQ0 3298 aa23.39■■□□□ 1.33
ATPAF1-202ENST00000371937 PLPP2O43688 288 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 HLA-DPB1P04440 258 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 RPS25P62851 125 aaKnown RBP23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 SRYQ05066 204 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 SOWAHCQ53LP3 525 aaPredicted RBP23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 RNFT1Q5M7Z0 435 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 SLC18B1Q6NT16 456 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 FAM220AQ7Z4H9 259 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 SPACA3Q8IXA5 215 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 ZNF454Q8N9F8 522 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 THEM6Q8WUY1 208 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 ROBO4Q8WZ75 1007 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 NSMAFQ92636 917 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 PNPLA2Q96AD5 504 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 ZNF385AQ96PM9 386 aaKnown RBP23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 OR2M2Q96R28 347 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 EXO5Q9H790 373 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 DKK4Q9UBT3 224 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 KLHDC2Q9Y2U9 406 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 TRGV5A0A0B4J1U4 118 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 IGKV1D-43A0A0B4J1Z2 117 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 E9PI62 339 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 SULT1C4O75897 302 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 TGFBR1P36897 503 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 CCDC58Q4VC31 144 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 TEX30Q5JUR7 227 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 CD200R1LQ6Q8B3 271 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 FCRLAQ7L513 359 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 ZIC4Q8N9L1 334 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 DYNC2LI1Q8TCX1 351 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 MCHR2Q969V1 340 aa23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 INTS12Q96CB8 462 aaKnown RBP23.38■■□□□ 1.33
ATPAF1-202ENST00000371937 ZFHX4Q86UP3 3567 aa23.37■■□□□ 1.33
ATPAF1-202ENST00000371937 ZNF716A6NP11 495 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms