RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 KCNS3Q9BQ31 491 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 TSSK6Q9BXA6 273 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 CLEC4MQ9H2X3 399 aaPredicted RBP12.06□□□□□ -0.48
SSR4-202ENST00000370085 NTN4Q9HB63 628 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 PAPOLBQ9NRJ5 636 aaKnown RBP12.06□□□□□ -0.48
SSR4-202ENST00000370085 RASSF1Q9NS23 344 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 TMEM38BQ9NVV0 291 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 KLHL21Q9UJP4 597 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 ORC6Q9Y5N6 252 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 SLC25A15Q9Y619 301 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 ABCA12Q86UK0 2595 aa12.06□□□□□ -0.48
SSR4-202ENST00000370085 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.05□□□□□ -0.48
SSR4-202ENST00000370085 SLC22A23A1A5C7 686 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 SOX14O95416 240 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 CD3EP07766 207 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 OSMP13725 252 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 B4GALT1P15291 398 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 PTAFRP25105 342 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 POU1F1P28069 291 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 ARR3P36575 388 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 SLC36A2Q495M3 483 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 SLC36A3Q495N2 470 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 SLC27A4Q6P1M0 643 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 ZNF295-AS1Q8N0V1 137 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 SLC22A24Q8N4F4 322 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 FAM169BQ8N8A8 192 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 ICA1LQ8NDH6 482 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 NSMAFQ92636 917 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 ZNF837Q96EG3 531 aaPredicted RBP12.05□□□□□ -0.48
SSR4-202ENST00000370085 PLPPR2Q96GM1 343 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 PRRG3Q9BZD7 231 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 SEMA6AQ9H2E6 1030 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 SEC61A2Q9H9S3 476 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 SIAEQ9HAT2 523 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 S100A14Q9HCY8 104 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 KRT84Q9NSB2 600 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 VSX1Q9NZR4 365 aaPredicted RBP12.05□□□□□ -0.48
SSR4-202ENST00000370085 CACNA1DQ01668 2161 aa12.05□□□□□ -0.48
SSR4-202ENST00000370085 HEATR1Q9H583 2144 aaKnown RBP12.04□□□□□ -0.48
SSR4-202ENST00000370085 A0A1W2PR80 420 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 ERICH4A6NGS2 130 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 RIIAD1A6NNX1 92 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 M0R1B8 84 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 BHLHE40O14503 412 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 KHDRBS3O75525 346 aaKnown RBP12.04□□□□□ -0.48
SSR4-202ENST00000370085 SEC14L2O76054 403 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 SLC2A10O95528 541 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 RAB36O95755 333 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 HRGP04196 525 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 HMGN1P05114 100 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 CD79AP11912 226 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 ZNF3P17036 446 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 PRKACGP22612 351 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 ZNF83P51522 516 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 PCBD1P61457 104 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 MRPS34P82930 218 aaKnown RBP12.04□□□□□ -0.48
SSR4-202ENST00000370085 FMODQ06828 376 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 GSG1Q2KHT4 349 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 C3orf36Q3SXR2 165 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 TMEM53Q6P2H8 277 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 FAHD1Q6P587 224 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 LEG1Q6P5S2 330 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 SLC25A47Q6Q0C1 308 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 SLC16A14Q7RTX9 510 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 WDFY1Q8IWB7 410 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 HS3ST5Q8IZT8 346 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 LNX2Q8N448 690 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 WDR31Q8NA23 367 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 OR4K13Q8NH42 304 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 RBM4BQ9BQ04 359 aaKnown RBP12.04□□□□□ -0.48
SSR4-202ENST00000370085 RBM4Q9BWF3 364 aaKnown RBP12.04□□□□□ -0.48
SSR4-202ENST00000370085 GABARAPL1Q9H0R8 117 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 SYT4Q9H2B2 425 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 NELFAQ9H3P2 528 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 RERGLQ9H628 205 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 RNF121Q9H920 327 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 RNF115Q9Y4L5 304 aa12.04□□□□□ -0.48
SSR4-202ENST00000370085 TACC2O95359 2948 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 A0A1W2PPL8 197 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 FAM221AA4D161 298 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 DEFB108AA8MXU0 73 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 H7C1C5 153 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 SLC16A7O60669 478 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 PTHP01270 115 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 CBR1P16152 277 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 HIST1H1CP16403 213 aaKnown RBP12.03□□□□□ -0.48
SSR4-202ENST00000370085 PAICSP22234 425 aaKnown RBP12.03□□□□□ -0.48
SSR4-202ENST00000370085 LCN6P62502 163 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 ESRRGP62508 458 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 GLO1Q04760 184 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 PLP2Q04941 152 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 BSPH1Q075Z2 132 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.03□□□□□ -0.48
SSR4-202ENST00000370085 SGCAQ16586 387 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 SLC35F1Q5T1Q4 408 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 NCMAPQ5T1S8 102 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 C22orf34Q6ZV56 151 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 GLB1L2Q8IW92 636 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 PARP8Q8N3A8 854 aa12.03□□□□□ -0.48
SSR4-202ENST00000370085 IL17RDQ8NFM7 739 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms