RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 RIPPLY2Q5TAB7 128 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 WDFY1Q8IWB7 410 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 OR52I1Q8NGK6 324 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 MCHR2Q969V1 340 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 ZNF775Q96BV0 537 aaPredicted RBP10.91□□□□□ -0.66
TUBE1-202ENST00000368662 MYCBPQ99417 103 aaPredicted RBP10.91□□□□□ -0.66
TUBE1-202ENST00000368662 JAM3Q9BX67 310 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 ADGRL4Q9HBW9 690 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 INPP5EQ9NRR6 644 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 USP24Q9UPU5 2620 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 EXOSC1Q9Y3B2 195 aaKnown RBP10.91□□□□□ -0.66
TUBE1-202ENST00000368662 COMMD3-BMI1R4GMX3 469 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 SS18L1O75177 396 aaPredicted RBP10.91□□□□□ -0.66
TUBE1-202ENST00000368662 IGHA1P01876 353 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 HLA-DQA2P01906 255 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 HRGP04196 525 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 QDPRP09417 244 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 SMIM18P0DKX4 95 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 C21orf33P30042 268 aaPredicted RBP10.91□□□□□ -0.66
TUBE1-202ENST00000368662 GUCA1AP43080 201 aaPredicted RBP10.91□□□□□ -0.66
TUBE1-202ENST00000368662 C10orf128Q5T292 105 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 CD163Q86VB7 1156 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 GLB1L2Q8IW92 636 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 SPARTQ8N0X7 666 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 GPR137CQ8N3F9 429 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 OR4F15Q8NGB8 312 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 SGCDQ92629 289 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 CNTNAP3BQ96NU0 1288 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 MNTQ99583 582 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 CNTNAP3Q9BZ76 1288 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 ULBP2Q9BZM5 246 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 LINC00470Q9BZP3 86 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 SLCO5A1Q9H2Y9 848 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 TP63Q9H3D4 680 aaPredicted RBP10.91□□□□□ -0.66
TUBE1-202ENST00000368662 ERGIC3Q9Y282 383 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 EMC9Q9Y3B6 208 aa10.91□□□□□ -0.66
TUBE1-202ENST00000368662 MBD3L4A6NDZ8 208 aaPredicted RBP10.9□□□□□ -0.66
TUBE1-202ENST00000368662 MBD3L3A6NE82 208 aaPredicted RBP10.9□□□□□ -0.66
TUBE1-202ENST00000368662 MBD3L5A6NJ08 208 aaPredicted RBP10.9□□□□□ -0.66
TUBE1-202ENST00000368662 EIF4E1BA6NMX2 242 aaKnown RBP10.9□□□□□ -0.66
TUBE1-202ENST00000368662 J3QRE1 110 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 MT-ND2P03891 347 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 AGTR1P30556 359 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 PIGFQ07326 219 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 ST3GAL2Q16842 350 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 C1orf185Q5T7R7 199 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 SLC25A47Q6Q0C1 308 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 PLXDC2Q6UX71 529 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 B3GLCTQ6Y288 498 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 ACBD7Q8N6N7 88 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 MBD3L2Q8NHZ7 208 aaPredicted RBP10.9□□□□□ -0.66
TUBE1-202ENST00000368662 ZNRF4Q8WWF5 429 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 APH1AQ96BI3 265 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 ZFP3Q96NJ6 502 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 MARCH7Q9H992 704 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 COA3Q9Y2R0 106 aaPredicted RBP10.9□□□□□ -0.66
TUBE1-202ENST00000368662 RP1L1Q8IWN7 2480 aaPredicted RBP10.9□□□□□ -0.66
TUBE1-202ENST00000368662 GTF3C1Q12789 2109 aa10.9□□□□□ -0.66
TUBE1-202ENST00000368662 FAM171A2A8MVW0 826 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 ZNHIT1O43257 154 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 OR2T7P0C7T2 308 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 LAP3P28838 519 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 NTF4P34130 210 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF84P51523 738 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 NR1H2P55055 460 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 HSF2Q03933 536 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 BLMHQ13867 455 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 TBCEQ15813 527 aaPredicted RBP10.9□□□□□ -0.67
TUBE1-202ENST00000368662 STK11Q15831 433 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 PRR30Q53SZ7 412 aaPredicted RBP10.9□□□□□ -0.67
TUBE1-202ENST00000368662 LRFN4Q6PJG9 635 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 PCSK4Q6UW60 755 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 RPTNQ6XPR3 784 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 FAM214BQ7L5A3 538 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 SLC16A9Q7RTY1 509 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 ERI1Q8IV48 349 aaKnown RBP10.9□□□□□ -0.67
TUBE1-202ENST00000368662 OR2T27Q8NH04 317 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 FCGR1BQ92637 280 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 MRPL48Q96GC5 212 aaKnown RBP10.9□□□□□ -0.67
TUBE1-202ENST00000368662 INTS14Q96SY0 518 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 CLEC4AQ9UMR7 237 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF835Q9Y2P0 537 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 TMEM14AQ9Y6G1 99 aa10.9□□□□□ -0.67
TUBE1-202ENST00000368662 MYL12BO14950 172 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 DHHO43323 396 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 SLC19A2O60779 497 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 KRT33AO76009 404 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 APOL3O95236 402 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 CRHP06850 196 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 MRPL3P09001 348 aaKnown RBP10.89□□□□□ -0.67
TUBE1-202ENST00000368662 EMX1Q04741 257 aaPredicted RBP10.89□□□□□ -0.67
TUBE1-202ENST00000368662 ETFDHQ16134 617 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 KCTD8Q6ZWB6 473 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 ABHD12BQ7Z5M8 362 aaPredicted RBP10.89□□□□□ -0.67
TUBE1-202ENST00000368662 TIGD4Q8IY51 512 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF100Q8IYN0 542 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF511Q8NB15 262 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 NSMAFQ92636 917 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 MND1Q9BWT6 205 aa10.89□□□□□ -0.67
TUBE1-202ENST00000368662 YIPF3Q9GZM5 350 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms