RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 H3F3CQ6NXT2 135 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 KRT74Q7RTS7 529 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 GPALPP1Q8IXQ4 340 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 TMEM156Q8N614 296 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 OR51A7Q8NH64 312 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 FAR1Q8WVX9 515 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 TMIGD2Q96BF3 282 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 KIRREL1Q96J84 757 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 GPX7Q96SL4 187 aaPredicted RBP7.84□□□□□ -1.15
TPM3-213ENST00000368545 CDCA4Q9BXL8 241 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 CDCP1Q9H5V8 836 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 AMBNQ9NP70 447 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 ACOT13Q9NPJ3 140 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 HPF1Q9NWY4 346 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 IL20RAQ9UHF4 553 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 CEPT1Q9Y6K0 416 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 TRAV36DV7A0A075B6V5 113 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 TMED7-TICAM2A0A0A6YYA0 188 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 LOC101059948A0A1B0GTJ6 334 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 A1L4Q6 167 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 RIIAD1A6NNX1 92 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 A8MVM7 634 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 GMFGO60234 142 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 IFNGP01579 166 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 PEPDP12955 493 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 ZNF3P17036 446 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 HK1P19367 917 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 IL11P20809 199 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 PAICSP22234 425 aaKnown RBP7.84□□□□□ -1.16
TPM3-213ENST00000368545 DCKP27707 260 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 SH3BGRP55822 239 aaPredicted RBP7.84□□□□□ -1.16
TPM3-213ENST00000368545 EGR4Q05215 589 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 RAB40BQ12829 278 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 DCTN2Q13561 401 aaKnown RBP7.84□□□□□ -1.16
TPM3-213ENST00000368545 FHL1Q13642 323 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 ARMC4Q5T2S8 1044 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 SYT6Q5T7P8 510 aaPredicted RBP7.84□□□□□ -1.16
TPM3-213ENST00000368545 UBE2UQ5VVX9 321 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 RNLSQ5VYX0 342 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 IL20RBQ6UXL0 311 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 DPY19L2P2Q6ZN68 376 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 ADGRE4PQ86SQ3 457 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 OR6S1Q8NH40 331 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 PAQR8Q8TEZ7 354 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 TMEM80Q96HE8 168 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 TNFRSF13CQ96RJ3 184 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 MYCBPQ99417 103 aaPredicted RBP7.84□□□□□ -1.16
TPM3-213ENST00000368545 LHPPQ9H008 270 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 PTGES2Q9H7Z7 377 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 VSX1Q9NZR4 365 aaPredicted RBP7.84□□□□□ -1.16
TPM3-213ENST00000368545 KLHL21Q9UJP4 597 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 RCE1Q9Y256 329 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 SLC6A5Q9Y345 797 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 TMED7Q9Y3B3 224 aa7.84□□□□□ -1.16
TPM3-213ENST00000368545 B5MCH6 92 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 IDH3BO43837 385 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 OR2T1O43869 369 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 NPIPB7O75200 414 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 RAB36O95755 333 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 STSP08842 583 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 ASAH2BP0C7U1 165 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 CDH11P55287 796 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 TMED1Q13445 227 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 CNPY1Q3B7I2 92 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 SLC25A53Q5H9E4 307 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 AADACL4Q5VUY2 407 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 ASB18Q6ZVZ8 466 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 NANOGNBQ7Z5D8 188 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 CLVS1Q8IUQ0 354 aaPredicted RBP7.83□□□□□ -1.16
TPM3-213ENST00000368545 MCEMP1Q8IX19 187 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 C10orf53Q8N6V4 93 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 PSD4Q8NDX1 1056 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 ADAMTS17Q8TE56 1095 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 ZNF524Q96C55 264 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 KLHDC3Q9BQ90 382 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 RACGAP1Q9H0H5 632 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 ZNF552Q9H707 407 aaPredicted RBP7.83□□□□□ -1.16
TPM3-213ENST00000368545 SH2D2AQ9NP31 389 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 CHST11Q9NPF2 352 aa7.83□□□□□ -1.16
TPM3-213ENST00000368545 LIN7CQ9NUP9 197 aaKnown RBP7.83□□□□□ -1.16
TPM3-213ENST00000368545 C17orf51A8MQB3 221 aa7.82□□□□□ -1.16
TPM3-213ENST00000368545 PRR23D1E9PI22 279 aaPredicted RBP7.82□□□□□ -1.16
TPM3-213ENST00000368545 H3BSA7 217 aa7.82□□□□□ -1.16
TPM3-213ENST00000368545 ARPC3O15145 178 aa7.82□□□□□ -1.16
TPM3-213ENST00000368545 ZNF208O43345 1280 aa7.82□□□□□ -1.16
TPM3-213ENST00000368545 TRMUO75648 421 aaKnown RBP7.82□□□□□ -1.16
TPM3-213ENST00000368545 PPP1R3DO95685 299 aa7.82□□□□□ -1.16
TPM3-213ENST00000368545 HIST1H2ABP04908 130 aa7.82□□□□□ -1.16
TPM3-213ENST00000368545 TSPAN19P0C672 248 aa7.82□□□□□ -1.16
TPM3-213ENST00000368545 PRR23D2P0DMB1 279 aaPredicted RBP7.82□□□□□ -1.16
TPM3-213ENST00000368545 APEHP13798 732 aaKnown RBP7.82□□□□□ -1.16
TPM3-213ENST00000368545 F8A1P23610 371 aa7.82□□□□□ -1.16
TPM3-213ENST00000368545 FKBP2P26885 142 aaKnown RBP7.82□□□□□ -1.16
TPM3-213ENST00000368545 C21orf33P30042 268 aaPredicted RBP7.82□□□□□ -1.16
TPM3-213ENST00000368545 HTR1FP30939 366 aa7.82□□□□□ -1.16
TPM3-213ENST00000368545 RPL4P36578 427 aaKnown RBP7.82□□□□□ -1.16
TPM3-213ENST00000368545 MTNR1AP48039 350 aa7.82□□□□□ -1.16
TPM3-213ENST00000368545 TMBIM6P55061 237 aa7.82□□□□□ -1.16
TPM3-213ENST00000368545 RPS3AP61247 264 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms