RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 RPL27P61353 136 aaKnown RBP16.38■□□□□ 0.21
CKS1B-203ENST00000368439 FMODQ06828 376 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 KRTAP1-1Q07627 177 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 RAB35Q15286 201 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 VHLLQ6RSH7 139 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 OAFQ86UD1 273 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 IGFN1Q86VF2 1251 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 DEFB107AQ8IZN7 70 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 OR10H5Q8NGA6 315 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 OR4K5Q8NGD3 323 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 ZNF519Q8TB69 540 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 TSPAN32Q96QS1 320 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 REG4Q9BYZ8 158 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 STX18Q9P2W9 335 aaKnown RBP16.38■□□□□ 0.21
CKS1B-203ENST00000368439 PMF1-BGLAPU3KQ54 211 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 YLPM1P49750 1951 aaKnown RBP16.38■□□□□ 0.21
CKS1B-203ENST00000368439 TMEM129A0AVI4 362 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 B9A039 149 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 hCG_2039718K7EN88 272 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 ARPC2O15144 300 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 RAB36O95755 333 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 FAM107AO95990 144 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 H1F0P07305 194 aaKnown RBP16.37■□□□□ 0.21
CKS1B-203ENST00000368439 BMP4P12644 408 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 NR4A1P22736 598 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 LIMS1P48059 325 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 NUDT6P53370 316 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 RAB39AQ14964 217 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 MSMPQ1L6U9 139 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 SLC25A47Q6Q0C1 308 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 C16orf89Q6UX73 402 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 CLDN22Q8N7P3 220 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 NABP1Q96AH0 204 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 POM121Q96HA1 1249 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 PYURFQ96I23 114 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 ALG12Q9BV10 488 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 SMURF2Q9HAU4 748 aa16.37■□□□□ 0.21
CKS1B-203ENST00000368439 IGHV4-30-2A0A087WSY4 118 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 A0A096LNT2 108 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 TRBV4-1A0A0J9YWV2 114 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 PTP4A3O75365 173 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 GMNNO75496 209 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 SERPINA5P05154 406 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 MMP7P09237 267 aaPredicted RBP16.36■□□□□ 0.21
CKS1B-203ENST00000368439 OMPP47874 163 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 ZNF84P51523 738 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 EFNA4P52798 201 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 MRPS34P82930 218 aaKnown RBP16.36■□□□□ 0.21
CKS1B-203ENST00000368439 SNTB2Q13425 540 aaKnown RBP16.36■□□□□ 0.21
CKS1B-203ENST00000368439 TOP3AQ13472 1001 aaPredicted RBP16.36■□□□□ 0.21
CKS1B-203ENST00000368439 DAG1Q14118 895 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 SEC23BQ15437 767 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 SPATS1Q496A3 300 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 KRT80Q6KB66 452 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 CDK20Q8IZL9 346 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 MAPK1IP1LQ8NDC0 245 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 SORCS2Q96PQ0 1159 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 DOK1Q99704 481 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 NDE1Q9NXR1 346 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 FBXL3Q9UKT7 428 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 FAM32AQ9Y421 112 aaKnown RBP16.36■□□□□ 0.21
CKS1B-203ENST00000368439 V9GYQ6 96 aa16.36■□□□□ 0.21
CKS1B-203ENST00000368439 ENTPD5O75356 428 aa16.35■□□□□ 0.21
CKS1B-203ENST00000368439 LY6HO94772 140 aa16.35■□□□□ 0.21
CKS1B-203ENST00000368439 FARS2O95363 451 aaKnown RBP16.35■□□□□ 0.21
CKS1B-203ENST00000368439 F12P00748 615 aaPredicted RBP16.35■□□□□ 0.21
CKS1B-203ENST00000368439 IGFBP1P08833 259 aaPredicted RBP16.35■□□□□ 0.21
CKS1B-203ENST00000368439 NPR2P20594 1047 aa16.35■□□□□ 0.21
CKS1B-203ENST00000368439 CDAP32320 146 aa16.35■□□□□ 0.21
CKS1B-203ENST00000368439 SNRPD2P62316 118 aaKnown RBP16.35■□□□□ 0.21
CKS1B-203ENST00000368439 ZBED5Q49AG3 693 aa16.35■□□□□ 0.21
CKS1B-203ENST00000368439 GKAP1Q5VSY0 366 aaPredicted RBP16.35■□□□□ 0.21
CKS1B-203ENST00000368439 SLC16A14Q7RTX9 510 aa16.35■□□□□ 0.21
CKS1B-203ENST00000368439 DPPA2Q7Z7J5 298 aa16.35■□□□□ 0.21
CKS1B-203ENST00000368439 ZNF525Q8N782 197 aa16.35■□□□□ 0.21
CKS1B-203ENST00000368439 FAM46AQ96IP4 442 aaKnown RBP16.35■□□□□ 0.21
CKS1B-203ENST00000368439 NSMCE2Q96MF7 247 aa16.35■□□□□ 0.21
CKS1B-203ENST00000368439 SIAEQ9HAT2 523 aa16.35■□□□□ 0.21
CKS1B-203ENST00000368439 TMEM5Q9Y2B1 443 aa16.35■□□□□ 0.21
CKS1B-203ENST00000368439 ABCA1O95477 2261 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 B2RBV5 119 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 GPRIN2O60269 458 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 MGRN1O60291 552 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 T-ENOLP0DO92 83 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 FXYD6P3P58550 94 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 ERVK-25P63136 954 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 CD47Q08722 323 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 FGD3Q5JSP0 725 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 THEM4Q5T1C6 240 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 FAM205BPQ63HN1 556 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 FOXL2NBQ6ZUU3 175 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 RRM2BQ7LG56 351 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 FAM122BQ7Z309 247 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 ARIH2OSQ8N7S6 290 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 NSL1Q96IY1 281 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 GPA33Q99795 319 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 RHNO1Q9BSD3 238 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 SIGLEC7Q9Y286 467 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 ADAM18Q9Y3Q7 739 aa16.34■□□□□ 0.21
CKS1B-203ENST00000368439 NAV3Q8IVL0 2385 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms