RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 BDKRB2P30411 391 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 GABRA5P31644 462 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 TAS2R31P59538 309 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 SNRPGP62308 76 aaKnown RBP10.57□□□□□ -0.72
SYNE1-204ENST00000367248 RPS25P62851 125 aaKnown RBP10.57□□□□□ -0.72
SYNE1-204ENST00000367248 NPSR1Q6W5P4 371 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 NICN1Q9BSH3 213 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 NELFAQ9H3P2 528 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 GALNT9Q9HCQ5 603 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 EMC7Q9NPA0 242 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 ZFP57Q9NU63 452 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 ECM29Q5VYK3 1845 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 TRAV17A0A0B4J275 112 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 hCG_1809904A0A1W2PP81 198 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 A0A1W2PPE2 198 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 A0A1W2PR64 198 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 A0A1W2PRV1 198 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 P2RY10O00398 339 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 S100A6P06703 90 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 RAB40ALP0C0E4 278 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 ERP29P30040 261 aaKnown RBP10.57□□□□□ -0.72
SYNE1-204ENST00000367248 PPP1CAP62136 330 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 LTBQ06643 244 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 HNF4GQ14541 408 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 GPNMBQ14956 572 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 RAB40AQ8WXH6 277 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 MUL1Q969V5 352 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 THAP7Q9BT49 309 aaPredicted RBP10.57□□□□□ -0.72
SYNE1-204ENST00000367248 GAPDHSO14556 408 aaPredicted RBP10.57□□□□□ -0.72
SYNE1-204ENST00000367248 HSF1Q00613 529 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 BTLAQ7Z6A9 289 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 MRGPRX4Q96LA9 322 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 TEAD3Q99594 435 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 DOCK2Q92608 1830 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 TBX19O60806 448 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 GUSBP08236 651 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 AIMP2Q13155 320 aaKnown RBP10.57□□□□□ -0.72
SYNE1-204ENST00000367248 IL11RAQ14626 422 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 FBXW12Q6X9E4 464 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 CHPT1Q8WUD6 406 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 KCTD12Q96CX2 325 aaKnown RBP10.57□□□□□ -0.72
SYNE1-204ENST00000367248 OR5M11Q96RB7 305 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 UBR3Q6ZT12 1888 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 AKAIN1P0CW23 69 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 AGTR1P30556 359 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 CCDC58Q4VC31 144 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 C16orf47Q6ZP98 133 aaPredicted RBP10.57□□□□□ -0.72
SYNE1-204ENST00000367248 FCRLAQ7L513 359 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 SLC16A9Q7RTY1 509 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 DCXRQ7Z4W1 244 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 LRRC28Q86X40 367 aaPredicted RBP10.57□□□□□ -0.72
SYNE1-204ENST00000367248 OR56B1Q8NGI3 324 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 KCNG3Q8TAE7 436 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 WDR34Q96EX3 536 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 SPIN2AQ99865 258 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 SPIN2BQ9BPZ2 258 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 NRIP3Q9NQ35 241 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 PAQR5Q9NXK6 330 aaPredicted RBP10.57□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF225Q9UK10 706 aa10.57□□□□□ -0.72
SYNE1-204ENST00000367248 TRGV5A0A0B4J1U4 118 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 C5orf49A4QMS7 147 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 IFNA17P01571 189 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 PTGER4P35408 488 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 PXKQ7Z7A4 578 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 GPR119Q8TDV5 335 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 LRRC3BQ96PB8 259 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 ARL6Q9H0F7 186 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 TREM1Q9NP99 234 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 SPINK2P20155 84 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 MSR1P21757 451 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 HTR2CP28335 458 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 MEF2DQ14814 521 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 SYT14P1Q58G82 188 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 VN1R4Q7Z5H5 301 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 SGPP2Q8IWX5 399 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 LILRB2Q8N423 598 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF419Q96HQ0 510 aaPredicted RBP10.56□□□□□ -0.72
SYNE1-204ENST00000367248 PRRT1Q99946 306 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 C7orf50Q9BRJ6 194 aaKnown RBP10.56□□□□□ -0.72
SYNE1-204ENST00000367248 SUCNR1Q9BXA5 334 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 NAA50Q9GZZ1 169 aaKnown RBP10.56□□□□□ -0.72
SYNE1-204ENST00000367248 HRASLSQ9HDD0 168 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 CACNG2Q9Y698 323 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 SGCEO43556 437 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 TUBG1P23258 451 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 SPATA46Q5T0L3 261 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 ZNF793Q6ZN11 406 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 ARIH2OSQ8N7S6 290 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 TMEM59Q9BXS4 323 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 FZR1Q9UM11 496 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 SCG5P05408 212 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 PRR35P0CG20 571 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 SRP14P37108 136 aaKnown RBP10.56□□□□□ -0.72
SYNE1-204ENST00000367248 ALKBH1Q13686 389 aaKnown RBP10.56□□□□□ -0.72
SYNE1-204ENST00000367248 GDPD3Q7L5L3 318 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.56□□□□□ -0.72
SYNE1-204ENST00000367248 SLC38A1Q9H2H9 487 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 CPNE5Q9HCH3 593 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 DOCK1Q14185 1865 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 TNFSF8P32971 234 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms