RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SLC7A5P2Q9GIP4 190 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 CGGBP1Q9UFW8 167 aaPredicted RBP12.32□□□□□ -0.44
PRKN-205ENST00000366897 KCNG2Q9UJ96 466 aa12.32□□□□□ -0.44
PRKN-205ENST00000366897 A0A087WUJ7 227 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 TGFBR3LH3BV60 316 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 NDUFA2O43678 99 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 ZNF254O75437 659 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 F12P00748 615 aaPredicted RBP12.31□□□□□ -0.44
PRKN-205ENST00000366897 AMY2AP04746 511 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 CSF1P09603 554 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 GJA4P35212 333 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 GPR18Q14330 331 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 ANKRD16Q6P6B7 361 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 C12orf45Q8N5I9 185 aaPredicted RBP12.31□□□□□ -0.44
PRKN-205ENST00000366897 OR4S1Q8NGB4 309 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 RPS4Y2Q8TD47 263 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 NKD1Q969G9 470 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 C3orf49Q96BT1 292 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 MRPL48Q96GC5 212 aaKnown RBP12.31□□□□□ -0.44
PRKN-205ENST00000366897 PDCD10Q9BUL8 212 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 SYT4Q9H2B2 425 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 SLC6A5Q9Y345 797 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 ETV7Q9Y603 341 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 LAMA1P25391 3075 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 TMEM82A0PJX8 343 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 GPR89AB7ZAQ6 455 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 GPR89BP0CG08 455 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 RPA2P15927 270 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 CSRP1P21291 193 aaKnown RBP12.31□□□□□ -0.44
PRKN-205ENST00000366897 KIR3DL2P43630 455 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 TFF2Q03403 129 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 UNQ6126/PRO20091Q6UXV3 157 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 SLC16A9Q7RTY1 509 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 FAM219AQ8IW50 185 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 GABRG1Q8N1C3 465 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 CA13Q8N1Q1 262 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 CLEC1AQ8NC01 280 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 CAMKVQ8NCB2 501 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 FAM3DQ96BQ1 224 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 ZFYVE21Q9BQ24 234 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 PELOQ9BRX2 385 aaKnown RBP12.31□□□□□ -0.44
PRKN-205ENST00000366897 NKX6-2Q9C056 277 aaPredicted RBP12.31□□□□□ -0.44
PRKN-205ENST00000366897 ZNF768Q9H5H4 540 aaKnown RBP12.31□□□□□ -0.44
PRKN-205ENST00000366897 ACTR10Q9NZ32 417 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 PLEKHA6Q9Y2H5 1048 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 CUL9Q8IWT3 2517 aa12.31□□□□□ -0.44
PRKN-205ENST00000366897 TRBV5-5A0A0J9YX44 114 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 RFPL4AA6NLU0 287 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 RFPL4AL1F8VTS6 287 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 RAB3DO95716 219 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 CD1AP06126 327 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 TACSTD2P09758 323 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 UBE2IP63279 158 aaKnown RBP12.3□□□□□ -0.44
PRKN-205ENST00000366897 ENPP2Q13822 863 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 WDR38Q5JTN6 314 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 TANGO2Q6ICL3 276 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 CBLN3Q6UW01 205 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 CD163Q86VB7 1156 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 CBLN2Q8IUK8 224 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 CTHRC1Q96CG8 243 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 ASB16Q96NS5 453 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 SLC39A1Q9NY26 324 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 SPACA6W5XKT8 324 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 TTC28Q96AY4 2481 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 FITM1A5D6W6 292 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 OR5H14A6NHG9 310 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 ARPC3O15145 178 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 AQP8O94778 261 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 LDOC1O95751 146 aaPredicted RBP12.3□□□□□ -0.44
PRKN-205ENST00000366897 PLGP00747 810 aaPredicted RBP12.3□□□□□ -0.44
PRKN-205ENST00000366897 HLA-DQA2P01906 255 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 GPR143P51810 404 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 RPS21P63220 83 aaKnown RBP12.3□□□□□ -0.44
PRKN-205ENST00000366897 GUCA2BQ16661 112 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 ITPRIPL2Q3MIP1 535 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 ALG10Q5BKT4 473 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 OR2W3Q7Z3T1 314 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 MDGA2Q7Z553 956 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 METTL27Q8N6F8 245 aaPredicted RBP12.3□□□□□ -0.44
PRKN-205ENST00000366897 OR1S2Q8NGQ3 325 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 VRK1Q99986 396 aaPredicted RBP12.3□□□□□ -0.44
PRKN-205ENST00000366897 BARX1Q9HBU1 254 aaPredicted RBP12.3□□□□□ -0.44
PRKN-205ENST00000366897 RASL12Q9NYN1 266 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 FBXL21Q9UKT6 434 aa12.3□□□□□ -0.44
PRKN-205ENST00000366897 NOP16Q9Y3C1 178 aaKnown RBP12.3□□□□□ -0.44
PRKN-205ENST00000366897 URADA6NGE7 173 aa12.29□□□□□ -0.44
PRKN-205ENST00000366897 C11orf98E9PRG8 122 aa12.29□□□□□ -0.44
PRKN-205ENST00000366897 SLC25A12O75746 678 aa12.29□□□□□ -0.44
PRKN-205ENST00000366897 WNT11O96014 354 aa12.29□□□□□ -0.44
PRKN-205ENST00000366897 APEHP13798 732 aaKnown RBP12.29□□□□□ -0.44
PRKN-205ENST00000366897 RAB3AP20336 220 aa12.29□□□□□ -0.44
PRKN-205ENST00000366897 S1PR1P21453 382 aa12.29□□□□□ -0.44
PRKN-205ENST00000366897 MAPK3P27361 379 aaPredicted RBP12.29□□□□□ -0.44
PRKN-205ENST00000366897 GRK6P43250 576 aa12.29□□□□□ -0.44
PRKN-205ENST00000366897 ZNHIT3Q15649 155 aaPredicted RBP12.29□□□□□ -0.44
PRKN-205ENST00000366897 SLC35D3Q5M8T2 416 aa12.29□□□□□ -0.44
PRKN-205ENST00000366897 SHEQ5VZ18 495 aa12.29□□□□□ -0.44
PRKN-205ENST00000366897 ASPHD2Q6ICH7 369 aa12.29□□□□□ -0.44
PRKN-205ENST00000366897 GPR148Q8TDV2 347 aa12.29□□□□□ -0.44
PRKN-205ENST00000366897 COMMD4Q9H0A8 199 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms