RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 NR0B2Q15466 257 aa13.06□□□□□ -0.32
APP-205ENST00000358918 ALG10BQ5I7T1 473 aa13.06□□□□□ -0.32
APP-205ENST00000358918 FIGNL1Q6PIW4 674 aa13.06□□□□□ -0.32
APP-205ENST00000358918 ZPLD1Q8TCW7 415 aa13.06□□□□□ -0.32
APP-205ENST00000358918 PIK3IP1Q96FE7 263 aa13.06□□□□□ -0.32
APP-205ENST00000358918 ADAD1Q96M93 576 aaKnown RBP13.06□□□□□ -0.32
APP-205ENST00000358918 PTCHD1Q96NR3 888 aa13.06□□□□□ -0.32
APP-205ENST00000358918 TCEAL7Q9BRU2 100 aa13.06□□□□□ -0.32
APP-205ENST00000358918 ATG5Q9H1Y0 275 aa13.06□□□□□ -0.32
APP-205ENST00000358918 OR51M1Q9H341 326 aa13.06□□□□□ -0.32
APP-205ENST00000358918 RNF122Q9H9V4 155 aa13.06□□□□□ -0.32
APP-205ENST00000358918 UNC80Q8N2C7 3258 aa13.05□□□□□ -0.32
APP-205ENST00000358918 TRBV5-7A0A0A0MS05 114 aa13.05□□□□□ -0.32
APP-205ENST00000358918 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.05□□□□□ -0.32
APP-205ENST00000358918 FAM171A2A8MVW0 826 aa13.05□□□□□ -0.32
APP-205ENST00000358918 UPK3AO75631 287 aa13.05□□□□□ -0.32
APP-205ENST00000358918 FARS2O95363 451 aaKnown RBP13.05□□□□□ -0.32
APP-205ENST00000358918 FOSL1P15407 271 aa13.05□□□□□ -0.32
APP-205ENST00000358918 CBR1P16152 277 aa13.05□□□□□ -0.32
APP-205ENST00000358918 S100PP25815 95 aa13.05□□□□□ -0.32
APP-205ENST00000358918 GJA4P35212 333 aa13.05□□□□□ -0.32
APP-205ENST00000358918 WASP42768 502 aa13.05□□□□□ -0.32
APP-205ENST00000358918 CXADRP78310 365 aa13.05□□□□□ -0.32
APP-205ENST00000358918 PDGFRLQ15198 375 aa13.05□□□□□ -0.32
APP-205ENST00000358918 RAB11BQ15907 218 aa13.05□□□□□ -0.32
APP-205ENST00000358918 LRRK1Q38SD2 2015 aa13.05□□□□□ -0.32
APP-205ENST00000358918 NKAPLQ5M9Q1 402 aa13.05□□□□□ -0.32
APP-205ENST00000358918 C5orf46Q6UWT4 87 aa13.05□□□□□ -0.32
APP-205ENST00000358918 DPY19L2P2Q6ZN68 376 aa13.05□□□□□ -0.32
APP-205ENST00000358918 ERN2Q76MJ5 926 aaKnown RBP13.05□□□□□ -0.32
APP-205ENST00000358918 PARGQ86W56 976 aa13.05□□□□□ -0.32
APP-205ENST00000358918 MISPQ8IVT2 679 aa13.05□□□□□ -0.32
APP-205ENST00000358918 GALNT16Q8N428 558 aa13.05□□□□□ -0.32
APP-205ENST00000358918 ZNF676Q8N7Q3 588 aa13.05□□□□□ -0.32
APP-205ENST00000358918 OR4A4PQ8NGN8 299 aa13.05□□□□□ -0.32
APP-205ENST00000358918 TMEM106AQ96A25 262 aa13.05□□□□□ -0.32
APP-205ENST00000358918 ZNF426Q9BUY5 554 aa13.05□□□□□ -0.32
APP-205ENST00000358918 PLA2G2FQ9BZM2 168 aa13.05□□□□□ -0.32
APP-205ENST00000358918 NMNAT2Q9BZQ4 307 aa13.05□□□□□ -0.32
APP-205ENST00000358918 TINAGL1Q9GZM7 467 aaPredicted RBP13.05□□□□□ -0.32
APP-205ENST00000358918 COMMD4Q9H0A8 199 aa13.05□□□□□ -0.32
APP-205ENST00000358918 GDE1Q9NZC3 331 aa13.05□□□□□ -0.32
APP-205ENST00000358918 DHCR7Q9UBM7 475 aaKnown RBP13.05□□□□□ -0.32
APP-205ENST00000358918 REV3LO60673 3130 aa13.05□□□□□ -0.32
APP-205ENST00000358918 ATG2AQ2TAZ0 1938 aa13.05□□□□□ -0.32
APP-205ENST00000358918 C5orf52A6NGY3 159 aa13.05□□□□□ -0.32
APP-205ENST00000358918 COLCA2A8K830 154 aa13.05□□□□□ -0.32
APP-205ENST00000358918 ZNF705EA8MWA4 302 aaPredicted RBP13.05□□□□□ -0.32
APP-205ENST00000358918 UBE2CO00762 179 aa13.05□□□□□ -0.32
APP-205ENST00000358918 AIMP2Q13155 320 aaKnown RBP13.05□□□□□ -0.32
APP-205ENST00000358918 SCGB2B2Q4G0G5 96 aa13.05□□□□□ -0.32
APP-205ENST00000358918 ARHGAP40Q5TG30 622 aa13.05□□□□□ -0.32
APP-205ENST00000358918 TMPRSS9Q7Z410 1059 aa13.05□□□□□ -0.32
APP-205ENST00000358918 OR4N5Q8IXE1 308 aa13.05□□□□□ -0.32
APP-205ENST00000358918 ZNF614Q8N883 585 aa13.05□□□□□ -0.32
APP-205ENST00000358918 COX14Q96I36 57 aa13.05□□□□□ -0.32
APP-205ENST00000358918 ALG12Q9BV10 488 aa13.05□□□□□ -0.32
APP-205ENST00000358918 NKX2-4Q9H2Z4 354 aa13.05□□□□□ -0.32
APP-205ENST00000358918 SLC17A5Q9NRA2 495 aa13.05□□□□□ -0.32
APP-205ENST00000358918 MRM2Q9UI43 246 aaKnown RBP13.05□□□□□ -0.32
APP-205ENST00000358918 LOC100289279A0A1B0GTE1 492 aa13.04□□□□□ -0.32
APP-205ENST00000358918 TMEM72A0PK05 275 aa13.04□□□□□ -0.32
APP-205ENST00000358918 LRRC72A6NJI9 287 aa13.04□□□□□ -0.32
APP-205ENST00000358918 LINC01565O15544 149 aa13.04□□□□□ -0.32
APP-205ENST00000358918 P2RX6O15547 441 aa13.04□□□□□ -0.32
APP-205ENST00000358918 GATCO43716 136 aaKnown RBP13.04□□□□□ -0.32
APP-205ENST00000358918 AK1P00568 194 aa13.04□□□□□ -0.32
APP-205ENST00000358918 PJVKQ0ZLH3 352 aa13.04□□□□□ -0.32
APP-205ENST00000358918 RUNX3Q13761 415 aa13.04□□□□□ -0.32
APP-205ENST00000358918 TRMT12Q53H54 448 aaKnown RBP13.04□□□□□ -0.32
APP-205ENST00000358918 ZCCHC12Q6PEW1 402 aa13.04□□□□□ -0.32
APP-205ENST00000358918 SLC16A9Q7RTY1 509 aa13.04□□□□□ -0.32
APP-205ENST00000358918 BIVMQ86UB2 503 aa13.04□□□□□ -0.32
APP-205ENST00000358918 BAP18Q8IXM2 172 aa13.04□□□□□ -0.32
APP-205ENST00000358918 ZNF595Q8IYB9 648 aa13.04□□□□□ -0.32
APP-205ENST00000358918 OR2L8Q8NGY9 312 aa13.04□□□□□ -0.32
APP-205ENST00000358918 GPR148Q8TDV2 347 aa13.04□□□□□ -0.32
APP-205ENST00000358918 DOK4Q8TEW6 326 aa13.04□□□□□ -0.32
APP-205ENST00000358918 RASD2Q96D21 266 aa13.04□□□□□ -0.32
APP-205ENST00000358918 TRIM2Q9C040 744 aa13.04□□□□□ -0.32
APP-205ENST00000358918 MKKSQ9NPJ1 570 aaPredicted RBP13.04□□□□□ -0.32
APP-205ENST00000358918 SMCO4Q9NRQ5 59 aa13.04□□□□□ -0.32
APP-205ENST00000358918 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
APP-205ENST00000358918 MYO9BQ13459 2157 aa13.04□□□□□ -0.32
APP-205ENST00000358918 F8VVB4 439 aa13.03□□□□□ -0.32
APP-205ENST00000358918 F8VWA3 439 aa13.03□□□□□ -0.32
APP-205ENST00000358918 ZNF208O43345 1280 aa13.03□□□□□ -0.32
APP-205ENST00000358918 P2RY2P41231 377 aa13.03□□□□□ -0.32
APP-205ENST00000358918 PLAURQ03405 335 aa13.03□□□□□ -0.32
APP-205ENST00000358918 OR7A5Q15622 319 aa13.03□□□□□ -0.32
APP-205ENST00000358918 EIF2S3LQ2VIR3 472 aaKnown RBP13.03□□□□□ -0.32
APP-205ENST00000358918 C2orf76Q3KRA6 126 aa13.03□□□□□ -0.32
APP-205ENST00000358918 USP53Q70EK8 1073 aa13.03□□□□□ -0.32
APP-205ENST00000358918 NAA40Q86UY6 237 aa13.03□□□□□ -0.32
APP-205ENST00000358918 BPIFB2Q8N4F0 458 aa13.03□□□□□ -0.32
APP-205ENST00000358918 MFSD9Q8NBP5 474 aa13.03□□□□□ -0.32
APP-205ENST00000358918 SLC30A7Q8NEW0 376 aa13.03□□□□□ -0.32
APP-205ENST00000358918 FAM3DQ96BQ1 224 aa13.03□□□□□ -0.32
APP-205ENST00000358918 SEH1LQ96EE3 360 aa13.03□□□□□ -0.32
APP-205ENST00000358918 CPNE2Q96FN4 548 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms