RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.68□□□□□ -0.7
SYN3-202ENST00000358763 MRM2Q9UI43 246 aaKnown RBP10.68□□□□□ -0.7
SYN3-202ENST00000358763 CSAG2Q9Y5P2 127 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 PLPP2O43688 288 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 RGS9O75916 674 aaPredicted RBP10.68□□□□□ -0.7
SYN3-202ENST00000358763 POU3F2P20265 443 aaPredicted RBP10.68□□□□□ -0.7
SYN3-202ENST00000358763 MAGEA5P43359 124 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 SUCLG1P53597 346 aaKnown RBP10.68□□□□□ -0.7
SYN3-202ENST00000358763 CLDN17P56750 224 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 CLRN1P58418 232 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 CSNK2A1P68400 391 aaPredicted RBP10.68□□□□□ -0.7
SYN3-202ENST00000358763 ARG2P78540 354 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 H3F3AP84243 136 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 HSF2Q03933 536 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 GLO1Q04760 184 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 DYNC1I2Q13409 638 aaKnown RBP10.68□□□□□ -0.7
SYN3-202ENST00000358763 CDK5R1Q15078 307 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 FAM27D1Q5T7N8 215 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 DMKNQ6E0U4 476 aaPredicted RBP10.68□□□□□ -0.7
SYN3-202ENST00000358763 YIPF7Q8N8F6 280 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 MDS2Q8NDY4 140 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 HTRA1Q92743 480 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 GHSRQ92847 366 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 ZNF552Q9H707 407 aaPredicted RBP10.68□□□□□ -0.7
SYN3-202ENST00000358763 GSTK1Q9Y2Q3 226 aa10.68□□□□□ -0.7
SYN3-202ENST00000358763 A0A087WV48 116 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 SHISA3A0PJX4 238 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 GJE1A6NN92 205 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 SP1P08047 785 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 SPINK2P20155 84 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 ALOX5APP20292 161 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 SOX6P35712 828 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 GDI2P50395 445 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 CAV3P56539 151 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 SIRPAP78324 504 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 PLGLB1Q02325 96 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 C11orf91Q3C1V1 193 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 ZNF684Q5T5D7 378 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 HBMQ6B0K9 141 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 NOXO1Q8NFA2 376 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 OR6Q1Q8NGQ2 317 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 OTOSQ8NHW6 89 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 ZNF775Q96BV0 537 aaPredicted RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 MRPL48Q96GC5 212 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 PDCD1LG2Q9BQ51 273 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 URB1O60287 2271 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 KIAA1549Q9HCM3 1950 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 TRBV2A0A0J9YWF9 115 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 CXCL13O43927 109 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 WNT11O96014 354 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 PGA4P0DJD7 388 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 PGA3P0DJD8 388 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 FGF9P31371 208 aaPredicted RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 EIF1AXP47813 144 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 MEOX1P50221 254 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 NHLH1Q02575 133 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 HNRNPA0Q13151 305 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 GPR50Q13585 617 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 RTP5Q14D33 572 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 SLC25A25Q6KCM7 469 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 DNM1P34Q6PK57 102 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 LRRN1Q6UXK5 716 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 FAM220AQ7Z4H9 259 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 FDCSPQ8NFU4 85 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 NEIL3Q8TAT5 605 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 KCNE4Q8WWG9 221 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 SLC25A44Q96H78 314 aaPredicted RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 ZNF385AQ96PM9 386 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 MRPL13Q9BYD1 178 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 SLC6A15Q9H2J7 730 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 B4GALT7Q9UBV7 327 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 A0A1B0GTH9 108 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 SMAD9O15198 467 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 EIF1BO60739 113 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 IGHG1P01857 330 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 KRT8P05787 483 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 NANOS3P60323 173 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 MFAP5Q13361 173 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 DCTN2Q13561 401 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 ZNF239Q16600 458 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 DEFB109BQ30KR1 87 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 LIPNQ5VXI9 398 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 BTLAQ7Z6A9 289 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 LINC00346Q8IVM7 164 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 TMEM251Q8N6I4 163 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 SLC26A10Q8NG04 563 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 SMIM19Q96E16 107 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 RBP7Q96R05 134 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 PPIL3Q9H2H8 161 aaKnown RBP10.67□□□□□ -0.7
SYN3-202ENST00000358763 SLCO1C1Q9NYB5 712 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 RASD1Q9Y272 281 aa10.67□□□□□ -0.7
SYN3-202ENST00000358763 A0A1W2PPL8 197 aa10.66□□□□□ -0.7
SYN3-202ENST00000358763 ZNF726A6NNF4 738 aa10.66□□□□□ -0.7
SYN3-202ENST00000358763 NPIPA2E9PIF3 369 aa10.66□□□□□ -0.7
SYN3-202ENST00000358763 NPIPA3F8WFD2 350 aa10.66□□□□□ -0.7
SYN3-202ENST00000358763 NME2P1O60361 137 aa10.66□□□□□ -0.7
SYN3-202ENST00000358763 KHDRBS3O75525 346 aaKnown RBP10.66□□□□□ -0.7
SYN3-202ENST00000358763 NCR1O76036 304 aa10.66□□□□□ -0.7
SYN3-202ENST00000358763 ABHD16AO95870 558 aa10.66□□□□□ -0.7
SYN3-202ENST00000358763 BMP4P12644 408 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms