RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 CMAHPQ9Y471 501 aa17.71■□□□□ 0.43
PPP1CA-202ENST00000358239 EFCAB9A8MZ26 197 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 hCG_2039718K7EN88 272 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 PTHP01270 115 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 MAKP20794 623 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 GLRXP35754 106 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 EVX1P49640 407 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 RPL27P61353 136 aaKnown RBP17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 KRTAP1-1Q07627 177 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 FXNQ16595 210 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 TMPRSS11FQ6ZWK6 438 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 SLC16A14Q7RTX9 510 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 PIGWQ7Z7B1 504 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 PGAM4Q8N0Y7 254 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 FAM156AQ8NDB6 213 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 MAPK1IP1LQ8NDC0 245 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 C10orf105Q8TEF2 133 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 SORCS2Q96PQ0 1159 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 KCNK17Q96T54 332 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 SH3GL3Q99963 347 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 ALG12Q9BV10 488 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 NDEL1Q9GZM8 345 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 GORASP2Q9H8Y8 452 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 NMNAT1Q9HAN9 279 aaPredicted RBP17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 DCAF13Q9NV06 445 aaKnown RBP17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 SLC7A8Q9UHI5 535 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 TMEM5Q9Y2B1 443 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 MALRD1Q5VYJ5 2156 aa17.7■□□□□ 0.42
PPP1CA-202ENST00000358239 A0A087WUU8 490 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 A0A1W2PRQ8 180 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 TLX2O43763 284 aaPredicted RBP17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 HSD17B1P14061 328 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 MRPS34P82930 218 aaKnown RBP17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 LSM11P83369 360 aaKnown RBP eCLIP17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 MYBPC1Q00872 1141 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 LOXL1Q08397 574 aaPredicted RBP17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 CD47Q08722 323 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 DGCR6Q14129 220 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 RAB39AQ14964 217 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 GKAP1Q5VSY0 366 aaPredicted RBP17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 ZNF584Q8IVC4 421 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 NMD3Q96D46 503 aaKnown RBP17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 DOK1Q99704 481 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 KCNN2Q9H2S1 579 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 RNF121Q9H920 327 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 SIAEQ9HAT2 523 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 TAGLN3Q9UI15 199 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 MAGEL2Q9UJ55 1249 aa17.69■□□□□ 0.42
PPP1CA-202ENST00000358239 TRAV27A0A087WT01 109 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 SLC22A23A1A5C7 686 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 A6NIZ1 184 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 H1F0P07305 194 aaKnown RBP17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 ITGA2P17301 1181 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 RHCEP18577 417 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 PDLIM4P50479 330 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 GYS2P54840 703 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 CTXN1P60606 82 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 RAP1BP61224 184 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 RAP1AP62834 184 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 TOP3AQ13472 1001 aaPredicted RBP17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 SPATS1Q496A3 300 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 SAMD4BQ5PRF9 694 aaKnown RBP17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 THEM4Q5T1C6 240 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 SVOPLQ8N434 492 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 LRRC75AQ8NAA5 344 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 SLC30A7Q8NEW0 376 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 OR51A7Q8NH64 312 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 FGFBP3Q8TAT2 258 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 SLC7A13Q8TCU3 470 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 NEU4Q8WWR8 484 aaPredicted RBP17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 HDAC2Q92769 488 aaKnown RBP17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 MRPL24Q96A35 216 aaKnown RBP17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 RBP7Q96R05 134 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 DYNLRB1Q9NP97 96 aa17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 KRCC1Q9NPI7 259 aaPredicted RBP17.68■□□□□ 0.42
PPP1CA-202ENST00000358239 A0A096LNT2 108 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 LOC390937A0A1W2PQ73 354 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 INAFM1C9JVW0 142 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 CD5LO43866 347 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 SLC2A10O95528 541 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 SNAP29O95721 258 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 PATE4P0C8F1 98 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 FUT4P22083 530 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 PCSK6P29122 969 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 MNAT1P51948 309 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 PLP2Q04941 152 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 FHL1Q13642 323 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 C16orf89Q6UX73 402 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 RNF148Q8N7C7 305 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 ANKS4BQ8N8V4 417 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 RBM15BQ8NDT2 890 aaKnown RBP17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 OR1J2Q8NGS2 313 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 OR13C2Q8NGS9 318 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 TNFRSF13CQ96RJ3 184 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 PIMREGQ9BSJ6 248 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 LRMDAQ9H2I8 198 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 NDUFAF4Q9P032 175 aa17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 ZNF346Q9UL40 294 aaKnown RBP17.67■□□□□ 0.42
PPP1CA-202ENST00000358239 IQCMA0A1B0GVH7 501 aa17.66■□□□□ 0.42
PPP1CA-202ENST00000358239 TMEM129A0AVI4 362 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms