RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CITED2Q99967 270 aaPredicted RBP9.02□□□□□ -0.97
CHD3-202ENST00000358181 C1orf123Q9NWV4 160 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 A0A1B0GTW7 788 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 TMEM221A6NGB7 291 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 M0R296 226 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 TNFSF11O14788 317 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 FABP7O15540 132 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 T-ENOLP0DO92 83 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 GPR176Q14439 515 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 TBPL2Q6SJ96 375 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 ETFBKMTQ8IXQ9 262 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 OR1L4Q8NGR5 311 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 DEDD2Q8WXF8 326 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 COQ10AQ96MF6 247 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 ZDHHC5Q9C0B5 715 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 NRSN2Q9GZP1 204 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 MRPS28Q9Y2Q9 187 aaKnown RBP9.02□□□□□ -0.97
CHD3-202ENST00000358181 TRBV23-1A0A0A0MS06 115 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 A0A0B4J203 849 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 A0A1B0GVG6 124 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 A0A1W2PNR3 127 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 FGF4P08620 206 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 ABCD3P28288 659 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 KCNAB1Q14722 419 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 THEM4Q5T1C6 240 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 HIST2H3AQ71DI3 136 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 ARHGEF39Q8N4T4 335 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 ARFGAP1Q8N6T3 406 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 ZNF778Q96MU6 729 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 INPP5KQ9BT40 448 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 MED20Q9H944 212 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 GAR1Q9NY12 217 aaKnown RBP9.02□□□□□ -0.97
CHD3-202ENST00000358181 HPGDSO60760 199 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 NFYAP23511 347 aaPredicted RBP9.02□□□□□ -0.97
CHD3-202ENST00000358181 TFPI2P48307 235 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 SULT1A2P50226 295 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 ZNF90Q03938 601 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 SPEM2Q0P670 501 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 BTNL8Q6UX41 500 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 OR5K2Q8NHB8 316 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 ZDHHC18Q9NUE0 388 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 COA4Q9NYJ1 87 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 PADI1Q9ULC6 663 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 MPC1LP0DKB6 136 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 SLC19A1P41440 591 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 TMEM182Q6ZP80 229 aaPredicted RBP9.02□□□□□ -0.97
CHD3-202ENST00000358181 OR4F5Q8NH21 305 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 SLC35B2Q8TB61 432 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 EAF1Q96JC9 268 aaPredicted RBP9.02□□□□□ -0.97
CHD3-202ENST00000358181 SLC2A13Q96QE2 648 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 OR4F4Q96R69 305 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 PRRT1Q99946 306 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 C12orf10Q9HB07 376 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 SLC23A1Q9UHI7 598 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 CACNG2Q9Y698 323 aa9.02□□□□□ -0.97
CHD3-202ENST00000358181 A0A1W2PR80 420 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 EPXP11678 715 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 APEX1P27695 318 aaKnown RBP9.01□□□□□ -0.97
CHD3-202ENST00000358181 CD200P41217 278 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 ACSM6Q6P461 480 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 RANBP10Q6VN20 620 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 THSD1Q9NS62 852 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 SLC5A6Q9Y289 635 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 MEIKINA0A087WXM9 373 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 STC2O76061 302 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 PDGFAP04085 211 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 TCTAP57738 103 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 SLC35A1P78382 337 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 FGFBP1Q14512 234 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 RHOUQ7L0Q8 258 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 NOXA1Q86UR1 476 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 RAB3CQ96E17 227 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 SMIM14Q96QK8 99 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 SLC30A3Q99726 388 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 ZNF337Q9Y3M9 751 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 CNMDO75829 334 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 S1PR4O95977 384 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 C19orf57Q0VDD7 668 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 PCLAFQ15004 111 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 OXA1LQ15070 435 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 ZNF260Q3ZCT1 412 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 TMEM244Q5VVB8 128 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 TANKQ92844 425 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 SLCO2A1Q92959 643 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 ISL2Q96A47 359 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 TMIGD2Q96BF3 282 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 ASB9Q96DX5 294 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 ZNF317Q96PQ6 595 aaPredicted RBP9.01□□□□□ -0.97
CHD3-202ENST00000358181 TMPRSS5Q9H3S3 457 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 LGALS13Q9UHV8 139 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 H0YIV9 168 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 MYOGP15173 224 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 CASP3P42574 277 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 CLLU1OSQ5K130 101 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 MARCH3Q86UD3 253 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 CDH26Q8IXH8 852 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 ZNF583Q96ND8 569 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 WDR76Q9H967 626 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 SLC35A3Q9Y2D2 325 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 HPRP00739 348 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms