RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TMEM244Q5VVB8 128 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 FAM219BQ5XKK7 198 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 SPATC1Q76KD6 591 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 TSPYL5Q86VY4 417 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 SIMC1Q8NDZ2 872 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 SLC30A7Q8NEW0 376 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 GPR32P1Q8NGA4 272 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 MBD3L2Q8NHZ7 208 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 PPP1R35Q8TAP8 253 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 ABHD3Q8WU67 409 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 ITFG2Q969R8 447 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 APOBEC3DQ96AK3 386 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 ZNF582Q96NG8 517 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 TBX5Q99593 518 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 EGLN3Q9H6Z9 239 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 TCF7L1Q9HCS4 588 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 ZNF391Q9UJN7 358 aa8.18□□□□□ -1.1
UPF2-202ENST00000357604 COA3Q9Y2R0 106 aaPredicted RBP8.18□□□□□ -1.1
UPF2-202ENST00000357604 A6NLC8 198 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 KDM4EB2RXH2 506 aaPredicted RBP8.17□□□□□ -1.1
UPF2-202ENST00000357604 PTGES3LE9PB15 166 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 FXYD1O00168 92 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 OIP5O43482 229 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 IGHMP01871 453 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 TP53P04637 393 aaPredicted RBP8.17□□□□□ -1.1
UPF2-202ENST00000357604 MST1P26927 711 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 RAB40BQ12829 278 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 LPCAT4Q643R3 524 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 GPR141Q7Z602 305 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 DOLPP1Q86YN1 238 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 CPOQ8IVL8 374 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 NEK7Q8TDX7 302 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 VRK1Q99986 396 aaPredicted RBP8.17□□□□□ -1.1
UPF2-202ENST00000357604 TP53BP1Q12888 1972 aaPredicted RBP8.17□□□□□ -1.1
UPF2-202ENST00000357604 METTL15A6NJ78 407 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 IFNL4K9M1U5 179 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 MRPS14O60783 128 aaKnown RBP8.17□□□□□ -1.1
UPF2-202ENST00000357604 SMPD2O60906 423 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 RPP14O95059 124 aaKnown RBP8.17□□□□□ -1.1
UPF2-202ENST00000357604 MRPL3P09001 348 aaKnown RBP8.17□□□□□ -1.1
UPF2-202ENST00000357604 PCMT1P22061 227 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 PTGDSP41222 190 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 ABLIM2Q6H8Q1 611 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 RNF128Q8TEB7 428 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 RTL8AQ9BWD3 113 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 SRXN1Q9BYN0 137 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 RNF115Q9Y4L5 304 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 HCKP08631 526 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 B4GALT1P15291 398 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 PSMD7P51665 324 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 C8orf82Q6P1X6 216 aaPredicted RBP8.17□□□□□ -1.1
UPF2-202ENST00000357604 Q6ZT83 130 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 CCDC103Q8IW40 242 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 MCHR2Q969V1 340 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 RASD2Q96D21 266 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 TECTBQ96PL2 329 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 DNAJC27Q9NZQ0 273 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 KCNN3Q9UGI6 736 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 A0A096LPE4 126 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 A0A1W2PPZ6 126 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 TNFRSF1AP19438 455 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 PRKACBP22694 351 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 GZMMP51124 257 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 CD300LDQ6UXZ3 194 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 SYT9Q86SS6 491 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 CSNK2A3Q8NEV1 391 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 OR1K1Q8NGR3 316 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 ST7LQ8TDW4 575 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 NMNAT3Q96T66 252 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 COQ7Q99807 217 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 EMC6Q9BV81 110 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 PRR14Q9BWN1 585 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 BCO1Q9HAY6 547 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 BRD7Q9NPI1 651 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 CMC2Q9NRP2 79 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 MED29Q9NX70 200 aa8.17□□□□□ -1.1
UPF2-202ENST00000357604 ACOT8O14734 319 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 SYT7O43581 403 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 DCKP27707 260 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 MTNR1AP48039 350 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 GAS1P54826 345 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 RAB1AP62820 205 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 PIGFQ07326 219 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 MED22Q15528 200 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 Q6ZPB1 254 aaPredicted RBP8.16□□□□□ -1.1
UPF2-202ENST00000357604 POC1BQ8TC44 478 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 SYT4Q9H2B2 425 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 MYOZ1Q9NP98 299 aaPredicted RBP8.16□□□□□ -1.1
UPF2-202ENST00000357604 ISPDA4D126 451 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 C5orf49A4QMS7 147 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 CHN2P52757 468 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 MVKQ03426 396 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 FNDC7Q5VTL7 733 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 IQCF1Q8N6M8 205 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 ACBD7Q8N6N7 88 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 SLC7A13Q8TCU3 470 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 ALKBH3Q96Q83 286 aaPredicted RBP8.16□□□□□ -1.1
UPF2-202ENST00000357604 PSD2Q9BQI7 771 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 UBQLN3Q9H347 655 aa8.16□□□□□ -1.1
UPF2-202ENST00000357604 SH2D2AQ9NP31 389 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms