RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 GAREM1Q9H706 876 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 SRPK3Q9UPE1 567 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 CNR1P21554 472 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 USF1P22415 310 aaPredicted RBP9.73□□□□□ -0.85
FXR1-202ENST00000357559 PIGAP37287 484 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 RING1Q06587 406 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 PARS2Q7L3T8 475 aaKnown RBP9.73□□□□□ -0.85
FXR1-202ENST00000357559 LSMEM2Q8N112 164 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 LURAP1Q96LR2 239 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 LOC102723971A0A1B0GUV8 181 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 C5orf49A4QMS7 147 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 ANKUB1A6NFN9 424 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 ZNF785A8K8V0 405 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 YKT6O15498 198 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 AQP9O43315 295 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 GUSBP08236 651 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 ICAM2P13598 275 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 MEOX1P50221 254 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 HSF1Q00613 529 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 TMEM200AQ86VY9 491 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 WDR5BQ86VZ2 330 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 CNTN4Q8IWV2 1026 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 TUSC5Q8IXB3 177 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 FOXQ1Q9C009 403 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 TMPRSS5Q9H3S3 457 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 ESRP2Q9H6T0 727 aaKnown RBP9.73□□□□□ -0.85
FXR1-202ENST00000357559 MSL2Q9HCI7 577 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 FZR1Q9UM11 496 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 SCML1Q9UN30 329 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 KIDINS220Q9ULH0 1771 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 SLC16A6O15403 523 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 TNFRSF4P43489 277 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 SLC35A1P78382 337 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 CLLU1OSQ5K130 101 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 H3F3CQ6NXT2 135 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 OLIG3Q7RTU3 272 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 FAM174AQ8TBP5 190 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 FGF13Q92913 245 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 TMEM230Q96A57 120 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 ZNF597Q96LX8 424 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 PIGQQ9BRB3 760 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 PLA2G12AQ9BZM1 189 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 AK3Q9UIJ7 227 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 CACNA1CQ13936 2221 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 MDC1Q14676 2089 aaKnown RBP9.73□□□□□ -0.85
FXR1-202ENST00000357559 ZNF814B7Z6K7 855 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 ZNF701M0R085 212 aaPredicted RBP9.73□□□□□ -0.85
FXR1-202ENST00000357559 BMPR1BO00238 502 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 MPGP29372 298 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 CTSCP53634 463 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 EMX1Q04741 257 aaPredicted RBP9.73□□□□□ -0.85
FXR1-202ENST00000357559 RTL8BQ17RB0 113 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 OTPQ5XKR4 325 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 OR5H6Q8NGV6 325 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 LRFN3Q9BTN0 628 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 NRSN2Q9GZP1 204 aa9.73□□□□□ -0.85
FXR1-202ENST00000357559 ZCWPW2A0A1B0GU75 182 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 ZC3H12DA2A288 527 aaKnown RBP9.72□□□□□ -0.85
FXR1-202ENST00000357559 ANKRD61A6NGH8 418 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 ZNF280AP59817 542 aaPredicted RBP9.72□□□□□ -0.85
FXR1-202ENST00000357559 WDR5P61964 334 aaKnown RBP9.72□□□□□ -0.85
FXR1-202ENST00000357559 SUMO1P63165 101 aaKnown RBP9.72□□□□□ -0.85
FXR1-202ENST00000357559 HTR4Q13639 388 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 ASTLQ6HA08 431 aaPredicted RBP9.72□□□□□ -0.85
FXR1-202ENST00000357559 CORO6Q6QEF8 472 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 RPUSD4Q96CM3 377 aaKnown RBP9.72□□□□□ -0.85
FXR1-202ENST00000357559 MBOAT4Q96T53 435 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 ZNF251Q9BRH9 671 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 MED18Q9BUE0 208 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 ZNF416Q9BWM5 594 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 EGLN1Q9GZT9 426 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 DNMT3BQ9UBC3 853 aaKnown RBP9.72□□□□□ -0.85
FXR1-202ENST00000357559 OR52A1Q9UKL2 312 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 USP22Q9UPT9 525 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 ELK1P19419 428 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 DEFB103AP81534 67 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 SEMA3BQ13214 749 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 IAH1Q2TAA2 248 aaPredicted RBP9.72□□□□□ -0.85
FXR1-202ENST00000357559 CPZQ66K79 652 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 OPN5Q6U736 354 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 CDC20BQ86Y33 519 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 M1APQ8TC57 530 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 TMEM106AQ96A25 262 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 PLPPR2Q96GM1 343 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 PNPP00491 289 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 RRASP10301 218 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 PCSK6P29122 969 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 CAMKMTQ7Z624 323 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 UMODL1-AS1Q8N2C9 162 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 DTD2Q96FN9 168 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 C16orf70Q9BSU1 422 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 SARGQ9BW04 601 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 MKRN2Q9H000 416 aaKnown RBP9.72□□□□□ -0.85
FXR1-202ENST00000357559 PHRF1Q9P1Y6 1649 aaKnown RBP9.72□□□□□ -0.85
FXR1-202ENST00000357559 TMED7-TICAM2A0A0A6YYA0 188 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 TNFSF11O14788 317 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 ZNF816Q0VGE8 651 aaPredicted RBP9.72□□□□□ -0.85
FXR1-202ENST00000357559 LCN15Q6UWW0 184 aa9.72□□□□□ -0.85
FXR1-202ENST00000357559 ZBED3Q96IU2 234 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms