RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ILF3Q12906 894 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 PLA2G7Q13093 441 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 C2orf68Q2NKX9 166 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 BEX5Q5H9J7 111 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC29A4Q7RTT9 530 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 ARRDC1Q8N5I2 433 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 MRPL43Q8N983 215 aaKnown RBP7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 MFSD9Q8NBP5 474 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 CCL4L1Q8NHW4 92 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 S100PBPQ96BU1 408 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 FOXN4Q96NZ1 517 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 RAB11FIP5Q9BXF6 653 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLITRK2Q9H156 845 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 KCNK15Q9H427 330 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR5V1Q9UGF6 321 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 LHX6Q9UPM6 363 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 MRPS2Q9Y399 296 aaKnown RBP7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 TBC1D3DA0A087WVF3 549 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 TBC1D3IA0A087WXS9 549 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 TVP23AA6NH52 213 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 COLCA2A8K830 154 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 TBC1D3LB9A6J9 549 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 ITGA10O75578 1167 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 THBS1P07996 1170 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 CT62P0C5K7 136 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 TBC1D3HP0C7X1 549 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 NQO2P16083 231 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC2A5P22732 501 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 NFYBP25208 207 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 MAPK3P27361 379 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 H2BFSP57053 126 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 SORDQ00796 357 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 GUCA2AQ02747 115 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 TBC1D3CQ6IPX1 549 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 LEG1Q6P5S2 330 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 FBXO46Q6PJ61 603 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 POMZP3Q6PJE2 187 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 BAIAP2L2Q6UXY1 529 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 OVCH1Q7RTY7 1134 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 REC114Q7Z4M0 266 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 TBC1D3Q8IZP1 549 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR6V1Q8N148 313 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 POMGNT2Q8NAT1 580 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 TMEM52Q8NDY8 209 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 GAL3ST3Q96A11 431 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLAMF9Q96A28 289 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC25A28Q96A46 364 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 Q96M85 177 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 GFI1Q99684 422 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 TOLLIPQ9H0E2 274 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 RNF122Q9H9V4 155 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 TBC1D29Q9UFV1 150 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 OPN4Q9UHM6 478 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 DAPP1Q9UN19 280 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 PCDHB10Q9UN67 800 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 CARHSP1Q9Y2V2 147 aaKnown RBP7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 CNTRLQ7Z7A1 2325 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 BRINP1O60477 761 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 CTSVO60911 334 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 RBBP9O75884 186 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 NDUFB2O95178 105 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 CEACAM5P06731 702 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 LIPCP11150 499 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 GTF2F2P13984 249 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 ACHEP22303 614 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 MPGP29372 298 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 DLX5P56178 289 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 TAS2R20P59543 309 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 SKP2Q13309 424 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 CST6Q15828 149 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 DCAF12L2Q5VW00 463 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 PWWP2BQ6NUJ5 590 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 FAM220AQ7Z4H9 259 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 CDRT4Q8N9R6 151 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 THEM6Q8WUY1 208 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 PNPLA2Q96AD5 504 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 ADAD1Q96M93 576 aaKnown RBP7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 TGIF2Q9GZN2 237 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 EXO5Q9H790 373 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 GFOD1Q9NXC2 390 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 CA14Q9ULX7 337 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF281Q9Y2X9 895 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 PCDHGA1Q9Y5H4 931 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 A0A1W2PPE3 182 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 A0A1W2PQU0 124 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR14I1A6ND48 311 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 BTBD17A6NE02 478 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 URADA6NGE7 173 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 ACOT7O00154 380 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 OGG1O15527 345 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 GSTZ1O43708 216 aaPredicted RBP7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 ABOP16442 354 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 MGMTP16455 207 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 ITGA3P26006 1051 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 AGBL4Q5VU57 503 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 FBXO42Q6P3S6 717 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 ENPP7Q6UWV6 458 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 ETFBKMTQ8IXQ9 262 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF676Q8N7Q3 588 aa7.5□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF383Q8NA42 475 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms