RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 OSGIN1Q9UJX0 560 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 TIMM10BQ9Y5J6 103 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 H7C1C5 153 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 HSPB6O14558 160 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 SH2D1BO14796 132 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ANGPTL7O43827 346 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 CSO75390 466 aaKnown RBP5.95□□□□□ -1.46
UPF2-201ENST00000356352 HPNP05981 417 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 TPOP07202 933 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ALDOCP09972 364 aaKnown RBP5.95□□□□□ -1.46
UPF2-201ENST00000356352 OMGP23515 440 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 C21orf33P30042 268 aaPredicted RBP5.95□□□□□ -1.46
UPF2-201ENST00000356352 BMI1P35226 326 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 CSNK1EP49674 416 aaKnown RBP5.95□□□□□ -1.46
UPF2-201ENST00000356352 DEFA6Q01524 100 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 IAH1Q2TAA2 248 aaPredicted RBP5.95□□□□□ -1.46
UPF2-201ENST00000356352 GLIPR1L1Q6UWM5 242 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 PLXDC2Q6UX71 529 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 TMEM64Q6YI46 380 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 YIPF5Q969M3 257 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 SEC22CQ9BRL7 303 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 IER2Q9BTL4 223 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 WWTR1Q9GZV5 400 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 RNF150Q9ULK6 438 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 RFXAPO00287 272 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ABCD4O14678 606 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 TXNL1O43396 289 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 TGOLN2O43493 480 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 RAF1P04049 648 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ATP1B1P05026 303 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 PIPP12273 146 aaPredicted RBP5.95□□□□□ -1.46
UPF2-201ENST00000356352 SSTR2P30874 369 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 GABRA4P48169 554 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 LIM2P55344 173 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 TEKQ02763 1124 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 C9orf152Q5JTZ5 239 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 PHYHD1Q5SRE7 291 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ABHD17CQ6PCB6 329 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 TMEM200AQ86VY9 491 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 CCDC71Q8IV32 467 aaPredicted RBP5.95□□□□□ -1.46
UPF2-201ENST00000356352 OR10K1Q8NGX5 313 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 MRPL38Q96DV4 380 aaKnown RBP5.95□□□□□ -1.46
UPF2-201ENST00000356352 CHST11Q9NPF2 352 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 KCNG2Q9UJ96 466 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 PROCRQ9UNN8 238 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 SEC14L6B5MCN3 397 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 M0QZ24 198 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ZNF749O43361 778 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 PMP2P02689 132 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 SRMP19623 302 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ACKR3P25106 362 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 RPL11P62913 178 aaKnown RBP5.95□□□□□ -1.46
UPF2-201ENST00000356352 ZNF85Q03923 595 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 FAPQ12884 760 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 RAB35Q15286 201 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ARHGAP11BQ3KRB8 267 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ADPRMQ3LIE5 342 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 BEX5Q5H9J7 111 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 OR10K2Q6IF99 312 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 FAM111BQ6SJ93 734 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 ZNF534Q76KX8 674 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 DCXRQ7Z4W1 244 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 FAM58AQ8N1B3 248 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 TEX19Q8NA77 164 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 MORN4Q8NDC4 146 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 OR51A4Q8NGJ6 313 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 OR52I1Q8NGK6 324 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 SARAFQ96BY9 339 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 SEH1LQ96EE3 360 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 THOC3Q96J01 351 aaKnown RBP5.95□□□□□ -1.46
UPF2-201ENST00000356352 CHRDL1Q9BU40 450 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 GLIPR2Q9H4G4 154 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 DUSP22Q9NRW4 184 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 NPFFR2Q9Y5X5 522 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 A3GALT2U3KPV4 340 aa5.95□□□□□ -1.46
UPF2-201ENST00000356352 LGALS8O00214 317 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 XRCC2O43543 280 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 THBS1P07996 1170 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 NME2P22392 152 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 CASP3P42574 277 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 MAGEB1P43366 347 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 RBP2P50120 134 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 CCR9P51686 369 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 MARCH3Q86UD3 253 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 HPSE2Q8WWQ2 592 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 MED20Q9H944 212 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 MTCH1Q9NZJ7 389 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 EXO1Q9UQ84 846 aaKnown RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 CA5BQ9Y2D0 317 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 STRAPQ9Y3F4 350 aaKnown RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 KPTNQ9Y664 436 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 MN1Q10571 1320 aaPredicted RBP5.94□□□□□ -1.46
UPF2-201ENST00000356352 MBP02144 154 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 F11P03951 625 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 TCRBP04435 133 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 T-ENOLP0DO92 83 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 MAKP20794 623 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 PAX6P26367 422 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 S100A11P31949 105 aa5.94□□□□□ -1.46
UPF2-201ENST00000356352 BCL6P41182 706 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms