RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 MT-ND1P03886 318 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 F13BP05160 661 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 IGFBP1P08833 259 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-204ENST00000356316 ASAH2BP0C7U1 165 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 FAM157BP0CG42 384 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 PGA4P0DJD7 388 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 PGA3P0DJD8 388 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 ANPEPP15144 967 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 APLNRP35414 380 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 RBM34P42696 430 aaKnown RBP9.15□□□□□ -0.94
CAPN3-204ENST00000356316 GUCA1AP43080 201 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-204ENST00000356316 UCP2P55851 309 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 KLF3P57682 345 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-204ENST00000356316 LAPTM4AQ15012 233 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 MAD2L1BPQ15013 274 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-204ENST00000356316 PCGF3Q3KNV8 242 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 ALKBH6Q3KRA9 238 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 NRN1LQ496H8 165 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 ELFN2Q5R3F8 820 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 NANOGP8Q6NSW7 305 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 UNQ6126/PRO20091Q6UXV3 157 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 CCDC80Q76M96 950 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 CARM1Q86X55 608 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 LRRC18Q8N456 261 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 SYT14Q8NB59 555 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 ICA1LQ8NDH6 482 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 RBM15BQ8NDT2 890 aaKnown RBP9.15□□□□□ -0.94
CAPN3-204ENST00000356316 OR4D11Q8NGI4 311 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 FGFBP3Q8TAT2 258 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 ZNF519Q8TB69 540 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 MCHR2Q969V1 340 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 LRRC58Q96CX6 371 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 BCL2L14Q9BZR8 327 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 POLR2J2Q9GZM3 115 aaKnown RBP9.15□□□□□ -0.94
CAPN3-204ENST00000356316 POLR2J3Q9H1A7 115 aaKnown RBP9.15□□□□□ -0.94
CAPN3-204ENST00000356316 OR51B6Q9H340 312 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 NARFLQ9H6Q4 476 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 CCNB1IP1Q9NPC3 277 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 INIPQ9NRY2 104 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 DECR2Q9NUI1 292 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 ARGLU1Q9NWB6 273 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-204ENST00000356316 TAAR3PQ9P1P4 343 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 EIF3KQ9UBQ5 218 aaKnown RBP9.15□□□□□ -0.94
CAPN3-204ENST00000356316 RIMS3Q9UJD0 308 aa9.15□□□□□ -0.94
CAPN3-204ENST00000356316 CENPBD1B2RD01 187 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 OR7A10O76100 309 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 LYPD3O95274 346 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 TFP02787 698 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 THY1P04216 161 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 SAGP10523 405 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-204ENST00000356316 NR2C1P13056 603 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 CCL2P13500 99 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 ACADSP16219 412 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 CCNOP22674 350 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 MRPS11P82912 194 aaKnown RBP9.14□□□□□ -0.95
CAPN3-204ENST00000356316 MYBPC1Q00872 1141 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 SRSF2Q01130 221 aaKnown RBP9.14□□□□□ -0.95
CAPN3-204ENST00000356316 TEKQ02763 1124 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 HSF2Q03933 536 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 RPL18Q07020 188 aaKnown RBP9.14□□□□□ -0.95
CAPN3-204ENST00000356316 ERICH5Q6P6B1 374 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 SHQ1Q6PI26 577 aaKnown RBP9.14□□□□□ -0.95
CAPN3-204ENST00000356316 DEF8Q6ZN54 512 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 RINLQ6ZS11 566 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 ZNF584Q8IVC4 421 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 PCYOX1LQ8NBM8 494 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 TMEM239Q8WW34 195 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 SGTBQ96EQ0 304 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 C1orf159Q96HA4 380 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 ZNF347Q96SE7 839 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 PRSS27Q9BQR3 290 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 ZNF426Q9BUY5 554 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 VIPAS39Q9H9C1 493 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 MEPEQ9NQ76 525 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-204ENST00000356316 HINT3Q9NQE9 182 aaKnown RBP9.14□□□□□ -0.95
CAPN3-204ENST00000356316 GID8Q9NWU2 228 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 MED31Q9Y3C7 131 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 GRIP1Q9Y3R0 1128 aa9.14□□□□□ -0.95
CAPN3-204ENST00000356316 GMNCA6NCL1 334 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 C17orf100A8MU93 164 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 CDC14BO60729 498 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 OR5F1O95221 314 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 SNAP29O95721 258 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 TROVE2P10155 538 aaKnown RBP eCLIP9.13□□□□□ -0.95
CAPN3-204ENST00000356316 THRBP10828 461 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 ZNF250P15622 560 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 GCH1P30793 250 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 UGT2B15P54855 530 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 CCL8P80075 99 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 PRR20EP86478 221 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 PRR20CP86479 221 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 PRR20DP86480 221 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 PRR20BP86481 221 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 PRR20AP86496 221 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 CD47Q08722 323 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 PIN1Q13526 163 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-204ENST00000356316 MAPRE2Q15555 327 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 SGCAQ16586 387 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 HIST3H3Q16695 136 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 MSMPQ1L6U9 139 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms