RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 CLCC1Q96S66 551 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 SEMA6CQ9H3T2 930 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 PRMT8Q9NR22 394 aaPredicted RBP17.15■□□□□ 0.34
PRPF39-201ENST00000355765 KCNK6Q9Y257 313 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 VSIG4Q9Y279 399 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 TRBV5-5A0A0J9YX44 114 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 ZNF860A6NHJ4 632 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 C1orf196B1AJZ1 125 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 AGPAT2O15120 278 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 CD79AP11912 226 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 ABCD3P28288 659 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 RAB28P51157 221 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 SKP1P63208 163 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 MESP2Q0VG99 397 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 FABP9Q0Z7S8 132 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 PPP1R1AQ13522 171 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 TCEA2Q15560 299 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 TSC22D1Q15714 1073 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 ELAVL1Q15717 326 aaKnown RBP17.14■□□□□ 0.34
PRPF39-201ENST00000355765 SKA3Q8IX90 412 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 PLPP7Q8NBV4 271 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 DCUN1D4Q92564 292 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 SLC6A7Q99884 636 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 NRIP2Q9BQI9 281 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 ZDHHC4Q9NPG8 344 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 SLC22A7Q9Y694 548 aa17.14■□□□□ 0.34
PRPF39-201ENST00000355765 SCN5AQ14524 2016 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 C13orf42A0A1B0GVH6 325 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 ELOA3DA6NLF2 546 aaPredicted RBP17.14■□□□□ 0.33
PRPF39-201ENST00000355765 SRPX2O60687 465 aaPredicted RBP17.14■□□□□ 0.33
PRPF39-201ENST00000355765 ZNF44P15621 663 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 GABRA3P34903 492 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 PBX2P40425 430 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 ACTBP60709 375 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 ACTG1P63261 375 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 ELOA3BQ3SY89 546 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 LINC01590Q5TEZ4 76 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 FAM219AQ8IW50 185 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 ELOA3Q8NG57 546 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 OR4E2Q8NGC2 313 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 OR13C8Q8NGS7 320 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 EDAQ92838 391 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 ZNF285Q96NJ3 590 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 NAA11Q9BSU3 229 aaPredicted RBP17.14■□□□□ 0.33
PRPF39-201ENST00000355765 ARID1AO14497 2285 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 A0A1W2PQ45 241 aaPredicted RBP17.14■□□□□ 0.33
PRPF39-201ENST00000355765 A0A1W2PQY0 241 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 CCL16O15467 120 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 LDB3O75112 727 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 DDX6P26196 483 aaKnown RBP eCLIP17.14■□□□□ 0.33
PRPF39-201ENST00000355765 F2RL1P55085 397 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 ACER2Q5QJU3 275 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 LHX8Q68G74 356 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 TMPPEQ6ZT21 453 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 RAB42Q8N4Z0 105 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 ZNF296Q8WUU4 475 aaPredicted RBP17.14■□□□□ 0.33
PRPF39-201ENST00000355765 TSEN15Q8WW01 171 aaKnown RBP17.14■□□□□ 0.33
PRPF39-201ENST00000355765 SLC25A21Q9BQT8 299 aaPredicted RBP17.14■□□□□ 0.33
PRPF39-201ENST00000355765 CST11Q9H112 138 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 OR51M1Q9H341 326 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 SRA1Q9HD15 236 aaKnown RBP17.14■□□□□ 0.33
PRPF39-201ENST00000355765 MSRAQ9UJ68 235 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 CSAG2Q9Y5P2 127 aa17.14■□□□□ 0.33
PRPF39-201ENST00000355765 EFCAB7A8K855 629 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 H7C1C5 153 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 CDC40O60508 579 aaKnown RBP eCLIP17.13■□□□□ 0.33
PRPF39-201ENST00000355765 HEXAP06865 529 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 TPT1P13693 172 aaKnown RBP17.13■□□□□ 0.33
PRPF39-201ENST00000355765 APEHP13798 732 aaKnown RBP17.13■□□□□ 0.33
PRPF39-201ENST00000355765 VAMP1P23763 118 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 CDKN2AP42771 156 aaKnown RBP17.13■□□□□ 0.33
PRPF39-201ENST00000355765 LCN6P62502 163 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 DEFB128Q7Z7B8 93 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 BAP18Q8IXM2 172 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 RNF141Q8WVD5 230 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 RSRP1Q9BUV0 290 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 LAT2Q9GZY6 243 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 MMP26Q9NRE1 261 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 RCC2Q9P258 522 aaKnown RBP17.13■□□□□ 0.33
PRPF39-201ENST00000355765 PCOLCE2Q9UKZ9 415 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 GTF2A1LQ9UNN4 478 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 DOCK9Q9BZ29 2069 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 GLCEO94923 617 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 TACSTD2P09758 323 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 ADRB3P13945 408 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 RAB11BQ15907 218 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 MST1LQ2TV78 715 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 TMEM200AQ86VY9 491 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 ZNF417Q8TAU3 575 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 OR2S2Q9NQN1 319 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 HCFC2Q9Y5Z7 792 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 C5orf42Q9H799 3197 aa17.13■□□□□ 0.33
PRPF39-201ENST00000355765 C5orf51A6NDU8 294 aa17.12■□□□□ 0.33
PRPF39-201ENST00000355765 GRXCR1A8MXD5 290 aa17.12■□□□□ 0.33
PRPF39-201ENST00000355765 UBE2CO00762 179 aa17.12■□□□□ 0.33
PRPF39-201ENST00000355765 TGM5O43548 720 aa17.12■□□□□ 0.33
PRPF39-201ENST00000355765 GPANK1O95872 356 aa17.12■□□□□ 0.33
PRPF39-201ENST00000355765 CD74P04233 296 aa17.12■□□□□ 0.33
PRPF39-201ENST00000355765 ZNF735P0CB33 412 aa17.12■□□□□ 0.33
PRPF39-201ENST00000355765 CCKBRP32239 447 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms