RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 LRRC18Q8N456 261 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 RNF148Q8N7C7 305 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 FAM156AQ8NDB6 213 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 BPIFA2Q96DR5 249 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 TSPAN32Q96QS1 320 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 KCNK17Q96T54 332 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 FAM107BQ9H098 131 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 EGFL7Q9UHF1 273 aa14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 ZNF346Q9UL40 294 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-201ENST00000355572 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.37□□□□□ -0.112e-7■■■□□ 17.7
PDLIM7-201ENST00000355572 A0A1W2PRG6 482 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 LRP5LA4QPB2 252 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 MCIDASD6RGH6 385 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 IMPA2O14732 288 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 TLX2O43763 284 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 CCDC22O60826 627 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 STAMBPO95630 424 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 RAB36O95755 333 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 CLPTM1O96005 669 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 IFNA14P01570 189 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 SERPINA5P05154 406 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 SCG5P05408 212 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 FAM157BP0CG42 384 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 OR8G3PP0DMU2 310 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 USF1P22415 310 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 GPR4P46093 362 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 PSME3P61289 254 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 ST3GAL3Q11203 375 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 TRIP10Q15642 601 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 C10orf128Q5T292 105 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 SLC25A47Q6Q0C1 308 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 HACD2Q6Y1H2 254 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 ARPINQ7Z6K5 226 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 HIPK1Q86Z02 1210 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 CPEB3Q8NE35 698 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 OR51A7Q8NH64 312 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 NSMAFQ92636 917 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 GTF3AQ92664 365 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 TXNIPQ9H3M7 391 aa14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 MOV10Q9HCE1 1003 aaKnown RBP14.37□□□□□ -0.11
PDLIM7-201ENST00000355572 A8MV72 311 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 H7C1C5 153 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 NCR1O76036 304 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 DIRAS1O95057 198 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 TP53P04637 393 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 BMP4P12644 408 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 APEX1P27695 318 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 GLRXP35754 106 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 LCN6P62502 163 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 PRKCDQ05655 676 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 DBPQ10586 325 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 HNRNPA0Q13151 305 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 ALKBH6Q3KRA9 238 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 IQCCQ4KMZ1 466 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 IFI44LQ53G44 452 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 ALG10Q5BKT4 473 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 OTPQ5XKR4 325 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 IL17RDQ8NFM7 739 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 ZNF519Q8TB69 540 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 HOPXQ9BPY8 73 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 EFCAB1Q9HAE3 211 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 CMAHPQ9Y471 501 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 FKBP7Q9Y680 259 aa14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 FBN1P35555 2871 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-201ENST00000355572 SVEP1Q4LDE5 3571 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 TANC2Q9HCD6 1990 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 SNX3O60493 162 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 LILRA1O75019 489 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 IGHMP01871 453 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 HPXP02790 462 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 IFNW1P05000 195 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 CSF3P09919 207 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 DAOP14920 347 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 ZNF32P17041 273 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 IGFBP5P24593 272 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 FXYD6P3P58550 94 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 CTXN1P60606 82 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 TRAM2Q15035 370 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 ELFN2Q5R3F8 820 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 IL17RELQ6ZVW7 336 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 SLC16A14Q7RTX9 510 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 SLC30A7Q8NEW0 376 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 GEMIN6Q8WXD5 167 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 MSI2Q96DH6 328 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 PIMREGQ9BSJ6 248 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 FNDC11Q9BVV2 318 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 RNF121Q9H920 327 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 DYNLRB1Q9NP97 96 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 ADAM18Q9Y3Q7 739 aa14.35□□□□□ -0.11
PDLIM7-201ENST00000355572 LOC390937A0A1W2PQ73 354 aa14.34□□□□□ -0.11
PDLIM7-201ENST00000355572 NPIPB13A6NJU9 1138 aa14.34□□□□□ -0.11
PDLIM7-201ENST00000355572 NPIPB4C9JG80 1138 aa14.34□□□□□ -0.11
PDLIM7-201ENST00000355572 WNT9BO14905 357 aa14.34□□□□□ -0.11
PDLIM7-201ENST00000355572 COL8A2P25067 703 aa14.34□□□□□ -0.11
PDLIM7-201ENST00000355572 LSP1P33241 339 aa14.34□□□□□ -0.11
PDLIM7-201ENST00000355572 MSX2P35548 267 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-201ENST00000355572 RBMXP38159 391 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-201ENST00000355572 WNT5AP41221 380 aa14.34□□□□□ -0.11
PDLIM7-201ENST00000355572 DAP3P51398 398 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-201ENST00000355572 RPL27P61353 136 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms