RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 A0A1W2PQL4 384 aaPredicted RBP13.85□□□□□ -0.19
CTSA-202ENST00000354880 KHDRBS3O75525 346 aaKnown RBP13.85□□□□□ -0.19
CTSA-202ENST00000354880 GPANK1O95872 356 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 FAM87AP0C7U9 286 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 HSMCR30P0CW71 290 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 NR2C1P13056 603 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
CTSA-202ENST00000354880 HCCSP53701 268 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 GALEQ14376 348 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 SLC16A9Q7RTY1 509 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 OR52N1Q8NH53 320 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 PNPLA2Q96AD5 504 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 SARAFQ96BY9 339 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 FOXN4Q96NZ1 517 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 MGLLQ99685 303 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 ARHGAP9Q9BRR9 750 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 ALG8Q9BVK2 526 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 GLTPQ9NZD2 209 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 LUZP4Q9P127 313 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 KLHL9Q9P2J3 617 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 ING1Q9UK53 422 aaPredicted RBP13.85□□□□□ -0.19
CTSA-202ENST00000354880 RCE1Q9Y256 329 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 CEPT1Q9Y6K0 416 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 IGKV3D-15A0A087WSY6 115 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 CCDC160A6NGH7 325 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 CSNK1A1P48729 337 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 SELENOPP49908 381 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 LINC00303Q3SY05 128 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 ARMCX4Q5H9R4 360 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 PLXDC2Q6UX71 529 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 CLVS1Q8IUQ0 354 aaPredicted RBP13.85□□□□□ -0.19
CTSA-202ENST00000354880 TMEM123Q8N131 208 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 OR6N1Q8NGY5 312 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 NSMAFQ92636 917 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 MCHR2Q969V1 340 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 INTS14Q96SY0 518 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 WDR76Q9H967 626 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 TUBD1Q9UJT1 453 aa13.85□□□□□ -0.19
CTSA-202ENST00000354880 CAB39Q9Y376 341 aaPredicted RBP13.85□□□□□ -0.19
CTSA-202ENST00000354880 SVILO95425 2214 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 GPR171O14626 319 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 AQP8O94778 261 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 QDPRP09417 244 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 PTGS2P35354 604 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 CD79BP40259 229 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 ZNF85Q03923 595 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 DOC2BQ14184 412 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 GPR107Q5VW38 600 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 TMPRSS11AQ6ZMR5 421 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 ZNF485Q8NCK3 441 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 OR6N2Q8NGY6 317 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 GATAD2BQ8WXI9 593 aa13.84□□□□□ -0.19
CTSA-202ENST00000354880 INTS12Q96CB8 462 aaKnown RBP13.84□□□□□ -0.19
CTSA-202ENST00000354880 DGCR14Q96DF8 476 aaKnown RBP13.84□□□□□ -0.19
CTSA-202ENST00000354880 A0A1B0GTH9 108 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 SCG5P05408 212 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 NTF4P34130 210 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 LIPAP38571 399 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 HSF2Q03933 536 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 RNPS1Q15287 305 aaKnown RBP13.83□□□□□ -0.2
CTSA-202ENST00000354880 SLC25A47Q6Q0C1 308 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 ZNF322Q6U7Q0 402 aaPredicted RBP13.83□□□□□ -0.2
CTSA-202ENST00000354880 FAM180AQ6UWF9 173 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 SSX6Q7RTT6 188 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 AAED1Q7RTV5 226 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 DPY19L4Q7Z388 723 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 CDC20BQ86Y33 519 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 GLB1L2Q8IW92 636 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 SLC26A10Q8NG04 563 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 TMEM54Q969K7 222 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 YIPF3Q9GZM5 350 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 MRPL22Q9NWU5 206 aaKnown RBP13.83□□□□□ -0.2
CTSA-202ENST00000354880 EMC3Q9P0I2 261 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 FOXD3Q9UJU5 478 aaPredicted RBP13.83□□□□□ -0.2
CTSA-202ENST00000354880 COPS3Q9UNS2 423 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 ZNF175Q9Y473 711 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 OR14I1A6ND48 311 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 TMEM8BA6NDV4 472 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 SLC22A20A6NK97 555 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 ZNF593O00488 134 aaPredicted RBP13.83□□□□□ -0.2
CTSA-202ENST00000354880 SLC43A1O75387 559 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 MLLT11Q13015 90 aaPredicted RBP13.83□□□□□ -0.2
CTSA-202ENST00000354880 LRFN4Q6PJG9 635 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 RFLNBQ8N5W9 214 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 SPRYD4Q8WW59 207 aaPredicted RBP13.83□□□□□ -0.2
CTSA-202ENST00000354880 TMEM45BQ96B21 275 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 OPALINQ96PE5 141 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 MNTQ99583 582 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 FUNDC2Q9BWH2 189 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 ISG20L2Q9H9L3 353 aaKnown RBP13.83□□□□□ -0.2
CTSA-202ENST00000354880 RNF122Q9H9V4 155 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 BCO1Q9HAY6 547 aa13.83□□□□□ -0.2
CTSA-202ENST00000354880 NOSIPQ9Y314 301 aaKnown RBP13.83□□□□□ -0.2
CTSA-202ENST00000354880 TLN1Q9Y490 2541 aaKnown RBP13.82□□□□□ -0.2
CTSA-202ENST00000354880 ZNF724A8MTY0 619 aa13.82□□□□□ -0.2
CTSA-202ENST00000354880 ZNF670-ZNF695F2Z2N8 137 aa13.82□□□□□ -0.2
CTSA-202ENST00000354880 MPZL1O95297 269 aa13.82□□□□□ -0.2
CTSA-202ENST00000354880 HRGP04196 525 aa13.82□□□□□ -0.2
CTSA-202ENST00000354880 GAAP10253 952 aa13.82□□□□□ -0.2
CTSA-202ENST00000354880 CD36P16671 472 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms