RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 RPS27P42677 84 aaKnown RBP20.06■□□□□ 0.8
NKX2-1-201ENST00000354822 ARRB1P49407 418 aaPredicted RBP20.06■□□□□ 0.8
NKX2-1-201ENST00000354822 GIMAP1Q8WWP7 306 aa20.06■□□□□ 0.8
NKX2-1-201ENST00000354822 C20orf85Q9H1P6 137 aa20.06■□□□□ 0.8
NKX2-1-201ENST00000354822 SLC22A11Q9NSA0 550 aa20.06■□□□□ 0.8
NKX2-1-201ENST00000354822 TNRC18O15417 2968 aaPredicted RBP20.06■□□□□ 0.8
NKX2-1-201ENST00000354822 MAS1P04201 325 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 DCNP07585 359 aaKnown RBP20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 MYF5P13349 255 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 PNLIPP16233 465 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 WDR38Q5JTN6 314 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 ZNF767PQ75MW2 155 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 DNAJA3Q96EY1 480 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 AMELYQ99218 206 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 TRIOBPQ9H2D6 2365 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 TRAV8-7A0A075B6U6 113 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 ANKRD20A5PA0PJZ0 165 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 ANKUB1A6NFN9 424 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 KIR3DL2P43630 455 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 SUMO3P55854 103 aaPredicted RBP20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 GLO1Q04760 184 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 ZP4Q12836 540 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 NUBPLQ8TB37 319 aa20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 ZNF587Q96SQ5 575 aaPredicted RBP20.05■□□□□ 0.8
NKX2-1-201ENST00000354822 A6NIZ1 184 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 WISP1O95388 367 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 HEXBP07686 556 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 TAS2R20P59543 309 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 RAP1BP61224 184 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 RAP1AP62834 184 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 SQSTM1Q13501 440 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 ST3GAL2Q16842 350 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 OLFML2AQ68BL7 652 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 LRRC69Q6ZNQ3 347 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 SHISA6Q6ZSJ9 500 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 KRT77Q7Z794 578 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 TSEN15Q8WW01 171 aaKnown RBP20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 NXPE2Q96DL1 559 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 MRPL22Q9NWU5 206 aaKnown RBP20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 ING1Q9UK53 422 aaPredicted RBP20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 SIT1Q9Y3P8 196 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 TTLL8A6PVC2 850 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 FTCDNL1E5RQL4 147 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 ADAM10O14672 748 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 XRCC3O43542 346 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 TGM6O95932 706 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 SPARCP09486 303 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 SULT1A3P0DMM9 295 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 SULT1A4P0DMN0 295 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 APOBEC1P41238 236 aaKnown RBP20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 ADAM8P78325 824 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 SFRP4Q6FHJ7 346 aaPredicted RBP20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 ZNF782Q6ZMW2 699 aaPredicted RBP20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 DNM1P46Q6ZS02 220 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 ANKRD37Q7Z713 158 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 APCDD1LQ8NCL9 501 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 NFAM1Q8NET5 270 aaPredicted RBP20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 OR51A4Q8NGJ6 313 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 OR10AC1Q8NH08 325 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 C8orf44Q96CB5 159 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 OR11A1Q9GZK7 315 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 KLK11Q9UBX7 282 aa20.04■□□□□ 0.8
NKX2-1-201ENST00000354822 GMDSO60547 372 aa20.03■□□□□ 0.8
NKX2-1-201ENST00000354822 CTLA4P16410 223 aa20.03■□□□□ 0.8
NKX2-1-201ENST00000354822 NAGAP17050 411 aa20.03■□□□□ 0.8
NKX2-1-201ENST00000354822 RIDAP52758 137 aaKnown RBP20.03■□□□□ 0.8
NKX2-1-201ENST00000354822 C6orf183Q5T699 404 aa20.03■□□□□ 0.8
NKX2-1-201ENST00000354822 C9orf62Q8N4C0 152 aa20.03■□□□□ 0.8
NKX2-1-201ENST00000354822 DNAAF1Q8NEP3 725 aa20.03■□□□□ 0.8
NKX2-1-201ENST00000354822 DACT3Q96B18 629 aaPredicted RBP20.03■□□□□ 0.8
NKX2-1-201ENST00000354822 MRPL15Q9P015 296 aaKnown RBP20.03■□□□□ 0.8
NKX2-1-201ENST00000354822 PPIEQ9UNP9 301 aaKnown RBP20.03■□□□□ 0.8
NKX2-1-201ENST00000354822 MEIKINA0A087WXM9 373 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 IGHV3-20A0A0C4DH32 117 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 AKR7A2O43488 359 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 GLSO94925 669 aaPredicted RBP20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 ALX3O95076 343 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 DLX5P56178 289 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 STPG1Q5TH74 334 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 DNM1P34Q6PK57 102 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 SLC35D2Q76EJ3 337 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 BMPERQ8N8U9 685 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 OR11G2Q8NGC1 345 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 MFSD8Q8NHS3 518 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 ZNF431Q8TF32 576 aaPredicted RBP20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 HGDQ93099 445 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 DUSP23Q9BVJ7 150 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 ULBP3Q9BZM4 244 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 SUSD2Q9UGT4 822 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 ASXL3Q9C0F0 2248 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 ANKRD34BA5PLL1 514 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 NPIPB13A6NJU9 1138 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 NPIPB4C9JG80 1138 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 SSNA1O43805 119 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 CSRP1P21291 193 aaKnown RBP20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 MAP2K6P52564 334 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 PUDPQ08623 228 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 NKAIN1Q4KMZ8 207 aa20.02■□□□□ 0.8
NKX2-1-201ENST00000354822 METTL11BQ5VVY1 283 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms