RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 GNG10P50151 68 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 LUMP51884 338 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 SEC61A1P61619 476 aaKnown RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 TRAM1Q15629 374 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ISXQ2M1V0 245 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 MAJINQ3KP22 176 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 GLT8D1Q68CQ7 371 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 OR5D16Q8NGK9 328 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 DTD1Q8TEA8 209 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 CMKLR1Q99788 373 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 BCL2L10Q9HD36 194 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 TMEM138Q9NPI0 162 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 P2RX2Q9UBL9 471 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 RCE1Q9Y256 329 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ANGPT4Q9Y264 503 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 BTBD17A6NE02 478 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 SLC31A2O15432 143 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 OR10H2O60403 315 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 MBP02144 154 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 SHC1P29353 583 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 CRISP1P54107 249 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 PRKAG1P54619 331 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 VWA2Q5GFL6 755 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 PLBD1Q6P4A8 553 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 OVCH1Q7RTY7 1134 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 SVBPQ8N300 66 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 ARL6IP6Q8N6S5 226 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 SEMA6DQ8NFY4 1073 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 NUBPLQ8TB37 319 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 RAB8BQ92930 207 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 SLC35A4Q96G79 324 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 RBM18Q96H35 190 aaKnown RBP9.17□□□□□ -0.94
SYNE1-203ENST00000354674 PTCHD1Q96NR3 888 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 DGAT2Q96PD7 388 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 POLDIP3Q9BY77 421 aaKnown RBP9.17□□□□□ -0.94
SYNE1-203ENST00000354674 VN1R1Q9GZP7 353 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 AKAP7Q9P0M2 348 aaPredicted RBP9.17□□□□□ -0.94
SYNE1-203ENST00000354674 KCNE3Q9Y6H6 103 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 CACNA1HO95180 2353 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 hCG_1809904A0A1W2PP81 198 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 A0A1W2PR64 198 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 A0A1W2PRV1 198 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 PRAMEF25A6NGN4 478 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 PRAMEF2O60811 474 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 AGR2O95994 175 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 HLA-DQB1P01920 261 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 RLN1P04808 185 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 CYC1P08574 325 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 PITPNBP48739 271 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 TRIP6Q15654 476 aaKnown RBP9.17□□□□□ -0.94
SYNE1-203ENST00000354674 CLEC12AQ5QGZ9 265 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 POMZP3Q6PJE2 187 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 UNQ6126/PRO20091Q6UXV3 157 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 NDUFAF7Q7L592 441 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 OR5M9Q8NGP3 310 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 PAQR8Q8TEZ7 354 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 PTPMT1Q8WUK0 201 aaPredicted RBP9.17□□□□□ -0.94
SYNE1-203ENST00000354674 TMEM19Q96HH6 336 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 CLCC1Q96S66 551 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 STACQ99469 402 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 STRADBQ9C0K7 418 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 MFFQ9GZY8 342 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 PIPOXQ9P0Z9 390 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 NUBP2Q9Y5Y2 271 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 DSPPQ9NZW4 1301 aa9.17□□□□□ -0.94
SYNE1-203ENST00000354674 DUXAA6NLW8 204 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 PRKYO43930 277 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SOX30O94993 753 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 BCHEP06276 602 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 ZGLP1P0C6A0 271 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 ACP2P11117 423 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 EPXP11678 715 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF28P17035 718 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 EMDP50402 254 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SELENOWP63302 87 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 TSC22D1Q15714 1073 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SYPL1Q16563 259 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SLC36A2Q495M3 483 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 LCN10Q6JVE6 187 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 MRPL14Q6P1L8 145 aaKnown RBP9.16□□□□□ -0.94
SYNE1-203ENST00000354674 CDRT4Q8N9R6 151 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SLC16A11Q8NCK7 471 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 OR4F15Q8NGB8 312 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 OR52I1Q8NGK6 324 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 STT3BQ8TCJ2 826 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SMAP2Q8WU79 429 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-203ENST00000354674 LMF2Q9BU23 707 aaKnown RBP9.16□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF471Q9BX82 626 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-203ENST00000354674 NMNAT1Q9HAN9 279 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-203ENST00000354674 DUSP22Q9NRW4 184 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 PCDHB10Q9UN67 800 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 KCNK7Q9Y2U2 307 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 LOXL2Q9Y4K0 774 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 OTOGLQ3ZCN5 2332 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 SCN2AQ99250 2005 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 TRBV4-1A0A0J9YWV2 114 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 A0A1B0GWJ7 208 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 H7C1Q1 480 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 GABRPO00591 440 aa9.16□□□□□ -0.94
SYNE1-203ENST00000354674 S100A8P05109 93 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms