RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 PPOXP50336 477 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 OR2B6P58173 313 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 PRPS1P60891 318 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 GPR50Q13585 617 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 CBFBQ13951 182 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 CTF1Q16619 201 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 UNC50Q53HI1 259 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 RUNDC3AQ59EK9 446 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ZMAT1Q5H9K5 638 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 CDC73Q6P1J9 531 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ZBTB49Q6ZSB9 765 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ZNF565Q8N9K5 539 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 OR6S1Q8NH40 331 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 DYNC2LI1Q8TCX1 351 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 MUL1Q969V5 352 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ZNF524Q96C55 264 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 RDH12Q96NR8 316 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 CITED4Q96RK1 184 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 JMJD8Q96S16 334 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ZNF382Q96SR6 550 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 NXF2Q9GZY0 626 aaKnown RBP9.73□□□□□ -0.85
RTN3-204ENST00000354497 NAA50Q9GZZ1 169 aaKnown RBP9.73□□□□□ -0.85
RTN3-204ENST00000354497 DYNLRB1Q9NP97 96 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 CA10Q9NS85 328 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 MED9Q9NWA0 146 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 HIF1ANQ9NWT6 349 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 ADPRHL2Q9NX46 363 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 PTTG3PQ9NZH4 202 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 SLC17A7Q9P2U7 560 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 HSPE1-MOB4S4R3N1 261 aa9.73□□□□□ -0.85
RTN3-204ENST00000354497 IGKV3D-15A0A087WSY6 115 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 A0A1W2PRQ8 180 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 TMEM82A0PJX8 343 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 SERINC4A6NH21 518 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 B4DSR2 109 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 LYNX1G3V0Z9 82 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 GPR171O14626 319 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 HSPA4LO95757 839 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 IFI6P09912 130 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 LYNX1P0DP58 116 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 EFNA1P20827 205 aaPredicted RBP9.72□□□□□ -0.85
RTN3-204ENST00000354497 GIFP27352 417 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 HLA-DMAP28067 261 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 CAPGP40121 348 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 YAP1P46937 504 aaKnown RBP9.72□□□□□ -0.85
RTN3-204ENST00000354497 HILS1P60008 231 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 ZNF273Q14593 569 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 ADIPOQQ15848 244 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 ZNF678Q5SXM1 525 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 XAF1Q6GPH4 301 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 DEF8Q6ZN54 512 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 TMPPEQ6ZT21 453 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 ZCCHC24Q8N2G6 241 aaKnown RBP9.72□□□□□ -0.85
RTN3-204ENST00000354497 C17orf78Q8N4C9 275 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 POC5Q8NA72 575 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 OR5W2Q8NH69 310 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 HOXB13Q92826 284 aaPredicted RBP9.72□□□□□ -0.85
RTN3-204ENST00000354497 C1QTNF3Q9BXJ4 246 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 SAP130Q9H0E3 1048 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 PCDHB16Q9NRJ7 776 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 TMEM216Q9P0N5 145 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 MALT1Q9UDY8 824 aa9.72□□□□□ -0.85
RTN3-204ENST00000354497 TGP01266 2768 aa9.71□□□□□ -0.85
RTN3-204ENST00000354497 IGHV1-18A0A0C4DH31 117 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 ZNF716A6NP11 495 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 LOC110117498-PIK3R3F6TDL0 507 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 DLGAP1O14490 977 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 CRCPO75575 148 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 CRYAAP02489 173 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 C1QBP02746 253 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 BPGMP07738 259 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 INHBAP08476 426 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 EPHA1P21709 976 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 LIMS1P48059 325 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 RAB25P57735 213 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 IL1RL1Q01638 556 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 TGFBR3Q03167 851 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 KLF10Q13118 480 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 FADDQ13158 208 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 HIKESHIQ53FT3 197 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 KLHL26Q53HC5 615 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 SYT14P1Q58G82 188 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 NOXRED1Q6NXP6 359 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 FAHD2BQ6P2I3 314 aaPredicted RBP9.71□□□□□ -0.86
RTN3-204ENST00000354497 SHISA2Q6UWI4 295 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 FRMD7Q6ZUT3 714 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 JAZF1Q86VZ6 243 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 CCDC103Q8IW40 242 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 C1orf162Q8NEQ5 155 aaPredicted RBP9.71□□□□□ -0.86
RTN3-204ENST00000354497 OR4D10Q8NGI6 311 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 OR52H1Q8NGJ2 320 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 PIGXQ8TBF5 258 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 UBASH3BQ8TF42 649 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 NEU4Q8WWR8 484 aaPredicted RBP9.71□□□□□ -0.86
RTN3-204ENST00000354497 SLC7A6Q92536 515 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 HDAC2Q92769 488 aaKnown RBP9.71□□□□□ -0.86
RTN3-204ENST00000354497 TMEM186Q96B77 213 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 PPCDCQ96CD2 204 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 CCDC124Q96CT7 223 aaKnown RBP9.71□□□□□ -0.86
RTN3-204ENST00000354497 FAHD2AQ96GK7 314 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms