RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 INSM1Q01101 510 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 TAGLNQ01995 201 aaKnown RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 GGTLC2Q14390 218 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 OPCMLQ14982 345 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 NDUFAF6Q330K2 333 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 NHLRC3Q5JS37 347 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 METTL11BQ5VVY1 283 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 SLC51BQ86UW2 128 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF433Q8N7K0 673 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 POMGNT2Q8NAT1 580 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 OR14A16Q8NHC5 309 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 ZPLD1Q8TCW7 415 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 RBPMSQ93062 196 aaKnown RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 ADIPOR1Q96A54 375 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 C8orf44Q96CB5 159 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 LCORQ96JN0 433 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 SFXN2Q96NB2 322 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 NMNAT3Q96T66 252 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 SPSB2Q99619 263 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF559Q9BR84 538 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 SLC7A5P2Q9GIP4 190 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 TGIF2Q9GZN2 237 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 NOX3Q9HBY0 568 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 MKKSQ9NPJ1 570 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 RDH8Q9NYR8 311 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 KLHL9Q9P2J3 617 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 NCDNQ9UBB6 729 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 MGAT4CQ9UBM8 478 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 PRELID1Q9Y255 219 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 MMACHCQ9Y4U1 282 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 IER3IP1Q9Y5U9 82 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 B3GALT1Q9Y5Z6 326 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 FAM186AA6NE01 2351 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 PLSCR5A0PG75 271 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 BLACEA4D250 179 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 PRR33A8MZF0 331 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF879B4DU55 563 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 MASP2O00187 686 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 ZFPL1O95159 310 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 ECDO95905 644 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 GP1BAP07359 652 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 IFI6P09912 130 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 ANXA7P20073 488 aaKnown RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 DCTDP32321 178 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 NANOS3P60323 173 aaKnown RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 SERTAD2Q14140 314 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 LINC00303Q3SY05 128 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 ZCCHC12Q6PEW1 402 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 GLDNQ6ZMI3 551 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 PRR22Q8IZ63 422 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 BCORP1Q8N888 145 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 FAM71CQ8NEG0 241 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 RGP1Q92546 391 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 WDR77Q9BQA1 342 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 C14orf105Q9NVL8 296 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 AKAP7Q9P0M2 348 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-204ENST00000353317 SRPK3Q9UPE1 567 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 ALPK2Q86TB3 2170 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 MED12Q93074 2177 aa7.78□□□□□ -1.16
TRIM55-204ENST00000353317 DOCK10Q96BY6 2186 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 SPTBN2O15020 2390 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 VSTM2BA6NLU5 285 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 PRR32B1ATL7 298 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 NPIPB9F8W1W9 429 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 PRAMEF2O60811 474 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 KHDRBS3O75525 346 aaKnown RBP7.77□□□□□ -1.17
TRIM55-204ENST00000353317 KRT33AO76009 404 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 CD1AP06126 327 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 ACSM4P0C7M7 580 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 GRPRP30550 384 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 DCDP81605 110 aaKnown RBP7.77□□□□□ -1.17
TRIM55-204ENST00000353317 MC2RQ01718 297 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 PON3Q15166 354 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 GXYLT1Q4G148 440 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 ELFN2Q5R3F8 820 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 YOD1Q5VVQ6 348 aaPredicted RBP7.77□□□□□ -1.17
TRIM55-204ENST00000353317 MRPL14Q6P1L8 145 aaKnown RBP7.77□□□□□ -1.17
TRIM55-204ENST00000353317 AGBL5Q8NDL9 886 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 PLPP5Q8NEB5 264 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 FCAMRQ8WWV6 532 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 RNF166Q96A37 237 aaPredicted RBP7.77□□□□□ -1.17
TRIM55-204ENST00000353317 ELMOD3Q96FG2 381 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 TSPAN10Q9H1Z9 355 aaPredicted RBP7.77□□□□□ -1.17
TRIM55-204ENST00000353317 FKRPQ9H9S5 495 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 C12orf10Q9HB07 376 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 DNAJB12Q9NXW2 375 aaKnown RBP7.77□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF69Q9UC07 566 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 ANKRD20A5PA0PJZ0 165 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 OR6C68A6NDL8 312 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 NAP1L6A6NFF2 107 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 NDUFB2O95178 105 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 WISP1O95388 367 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 ONECUT2O95948 504 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 CPN1P15169 458 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 IFNGR1P15260 489 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 GALNSP34059 522 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 DIO1P49895 249 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 P2RX1P51575 399 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 MAP2K6P52564 334 aa7.77□□□□□ -1.17
TRIM55-204ENST00000353317 AP3S2P59780 193 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms