RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SSNA1O43805 119 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 GLSO94925 669 aaPredicted RBP19.95■□□□□ 0.78
UPF3A-201ENST00000351487 HPXP02790 462 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 ZP1P60852 638 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 ROM1Q03395 351 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 MEP1BQ16820 701 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 KANSL1Q7Z3B3 1105 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 SIX5Q8N196 739 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 DLL4Q9NR61 685 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 NKIRAS2Q9NYR9 191 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 MRPS17Q9Y2R5 130 aaKnown RBP19.95■□□□□ 0.78
UPF3A-201ENST00000351487 SDHBP21912 280 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 IGFBP4P22692 258 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 CAMK2DQ13557 499 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 SLC18B1Q6NT16 456 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 LANCL3Q6ZV70 420 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 RNF128Q8TEB7 428 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 ATOH1Q92858 354 aaPredicted RBP19.95■□□□□ 0.78
UPF3A-201ENST00000351487 DACT3Q96B18 629 aaPredicted RBP19.95■□□□□ 0.78
UPF3A-201ENST00000351487 UTP23Q9BRU9 249 aaKnown RBP19.95■□□□□ 0.78
UPF3A-201ENST00000351487 FGF21Q9NSA1 209 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 FLVCR2Q9UPI3 526 aa19.95■□□□□ 0.78
UPF3A-201ENST00000351487 CACNA1CQ13936 2221 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 PLPP3O14495 311 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 HLA-DQA2P01906 255 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 VEGFCP49767 419 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 METTL11BQ5VVY1 283 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 ULBP3Q9BZM4 244 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 CTSFQ9UBX1 484 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 SCP2D1Q9UJQ7 156 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 TTLL8A6PVC2 850 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 XRCC3O43542 346 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 AHSA1O95433 338 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 TMIGD3P0DMS9 266 aaPredicted RBP19.94■□□□□ 0.78
UPF3A-201ENST00000351487 ZBTB37Q5TC79 503 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 WDR74Q6RFH5 385 aaPredicted RBP19.94■□□□□ 0.78
UPF3A-201ENST00000351487 C8orf44Q96CB5 159 aa19.94■□□□□ 0.78
UPF3A-201ENST00000351487 ELF5Q9UKW6 265 aaPredicted RBP19.94■□□□□ 0.78
UPF3A-201ENST00000351487 SLC22A23A1A5C7 686 aa19.93■□□□□ 0.78
UPF3A-201ENST00000351487 OR2T1O43869 369 aa19.93■□□□□ 0.78
UPF3A-201ENST00000351487 SLC16A7O60669 478 aa19.93■□□□□ 0.78
UPF3A-201ENST00000351487 PTHLHP12272 177 aa19.93■□□□□ 0.78
UPF3A-201ENST00000351487 CTLA4P16410 223 aa19.93■□□□□ 0.78
UPF3A-201ENST00000351487 PER3P56645 1201 aa19.93■□□□□ 0.78
UPF3A-201ENST00000351487 SLC35D2Q76EJ3 337 aa19.93■□□□□ 0.78
UPF3A-201ENST00000351487 MISPQ8IVT2 679 aa19.93■□□□□ 0.78
UPF3A-201ENST00000351487 GLB1L2Q8IW92 636 aa19.93■□□□□ 0.78
UPF3A-201ENST00000351487 TSEN15Q8WW01 171 aaKnown RBP19.93■□□□□ 0.78
UPF3A-201ENST00000351487 ZNF768Q9H5H4 540 aaKnown RBP19.93■□□□□ 0.78
UPF3A-201ENST00000351487 BEX1Q9HBH7 125 aa19.93■□□□□ 0.78
UPF3A-201ENST00000351487 H0YC42 278 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 OR6A2O95222 327 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 TPOP07202 933 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 ZNF24P17028 368 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 DCTDP32321 178 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 MECP2P51608 486 aaKnown RBP19.92■□□□□ 0.78
UPF3A-201ENST00000351487 ODF4Q2M2E3 257 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 ANKRD16Q6P6B7 361 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 COX15Q7KZN9 410 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 SLC25A45Q8N413 288 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 OR6S1Q8NH40 331 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 ZNF587Q96SQ5 575 aaPredicted RBP19.92■□□□□ 0.78
UPF3A-201ENST00000351487 FOXQ1Q9C009 403 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 ZNF436Q9C0F3 470 aaPredicted RBP19.92■□□□□ 0.78
UPF3A-201ENST00000351487 OR10A4Q9H209 315 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 FTCDNL1E5RQL4 147 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 SPARCP09486 303 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 GIMD1P0DJR0 217 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 SLC26A5P58743 744 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 PLA2G7Q13093 441 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 KCTD18Q6PI47 426 aaPredicted RBP19.92■□□□□ 0.78
UPF3A-201ENST00000351487 OR8K3Q8NH51 312 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 DNASE2BQ8WZ79 361 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 MED30Q96HR3 178 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 OR11A1Q9GZK7 315 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 TGIF2Q9GZN2 237 aa19.92■□□□□ 0.78
UPF3A-201ENST00000351487 NPDC1Q9NQX5 325 aaPredicted RBP19.92■□□□□ 0.78
UPF3A-201ENST00000351487 ARPC1BO15143 372 aaKnown RBP19.91■□□□□ 0.78
UPF3A-201ENST00000351487 RNF4P78317 190 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 C19orf57Q0VDD7 668 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 COL28A1Q2UY09 1125 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 LINC00303Q3SY05 128 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 DUSP19Q8WTR2 217 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 SEMA4CQ9C0C4 833 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 NOX3Q9HBY0 568 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 H7C417 338 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 PNPP00491 289 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 DNASE1P24855 282 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 CCKBRP32239 447 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 ADAM8P78325 824 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 LYPD8Q6UX82 237 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 GLDNQ6ZMI3 551 aaPredicted RBP19.91■□□□□ 0.78
UPF3A-201ENST00000351487 Q6ZTK2 550 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 TMEM234Q8WY98 164 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 FOXN4Q96NZ1 517 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 SLC22A11Q9NSA0 550 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 B3GNT2Q9NY97 397 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 MTFP1Q9UDX5 166 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 SRPK3Q9UPE1 567 aa19.91■□□□□ 0.78
UPF3A-201ENST00000351487 FREM3P0C091 2139 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms