RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 WDPCPO95876 746 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 GZMKP49863 264 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 ARFIP1P53367 373 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 ACTA2P62736 377 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 ACTG2P63267 376 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 CDK5R1Q15078 307 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 SLC36A2Q495M3 483 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 DPY19L2P2Q6ZN68 376 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 MS4A15Q8N5U1 240 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 NPEPL1Q8NDH3 523 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 OR1N1Q8NGS0 311 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 OR14L1PQ8NHC6 308 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 YIPF5Q969M3 257 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 STMN3Q9NZ72 180 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 BAIAP2Q9UQB8 552 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 TNRC18O15417 2968 aaPredicted RBP9.4□□□□□ -0.9
SMPD4-201ENST00000351288 SPTBN1Q01082 2364 aaKnown RBP9.4□□□□□ -0.9
SMPD4-201ENST00000351288 LOC400499M0QZD8 3231 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 HPXP02790 462 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 TCRBP04435 133 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 SLC6A1P30531 599 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 RPS11P62280 158 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMPD4-201ENST00000351288 MAB21L1Q13394 359 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 SNTB2Q13425 540 aaKnown RBP9.4□□□□□ -0.9
SMPD4-201ENST00000351288 TMEM69Q5SWH9 247 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 LAMTOR1Q6IAA8 161 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 TMED4Q7Z7H5 227 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 PLPP7Q8NBV4 271 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 SLC22A8Q8TCC7 542 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 AMELYQ99218 206 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 MMP25Q9NPA2 562 aa9.4□□□□□ -0.9
SMPD4-201ENST00000351288 TP53I11O14683 189 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 ZNF780AO75290 641 aaPredicted RBP9.4□□□□□ -0.91
SMPD4-201ENST00000351288 TRIM3O75382 744 aaPredicted RBP9.4□□□□□ -0.91
SMPD4-201ENST00000351288 LIPCP11150 499 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 HLA-DOBP13765 273 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 ZNF24P17028 368 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 NPR2P20594 1047 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 IL11P20809 199 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 FOXF1Q12946 379 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 ZNF74Q16587 644 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 YIF1BQ5BJH7 314 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 GALNTL5Q7Z4T8 443 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 ZNF283Q8N7M2 679 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 OR52I2Q8NH67 350 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 GIMAP1Q8WWP7 306 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 SMIM19Q96E16 107 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 KLHL15Q96M94 604 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 LIN7BQ9HAP6 207 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 KLHL21Q9UJP4 597 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 EMC9Q9Y3B6 208 aa9.4□□□□□ -0.91
SMPD4-201ENST00000351288 MUC6Q6W4X9 2439 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 FAM25EA8MYX2 175 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 IL33O95760 270 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 DHFRP00374 187 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 OR2T7P0C7T2 308 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 SRMP19623 302 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 MST1P26927 711 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 UQCRC1P31930 480 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 GDNFP39905 211 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 VEGFCP49767 419 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 LTBQ06643 244 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 FUT7Q11130 342 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 SCGB2B2Q4G0G5 96 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 FAM69AQ5T7M9 428 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 TMEM164Q5U3C3 297 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 THOC7Q6I9Y2 204 aaKnown RBP9.39□□□□□ -0.91
SMPD4-201ENST00000351288 OR10K2Q6IF99 312 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 YRDCQ86U90 279 aaKnown RBP9.39□□□□□ -0.91
SMPD4-201ENST00000351288 DUSP18Q8NEJ0 188 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 OR2T27Q8NH04 317 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 EMC7Q9NPA0 242 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 IGKV1D-42A0A075B6H8 117 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 RGS13O14921 159 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 SLC43A1O75387 559 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 LDOC1O95751 146 aaPredicted RBP9.39□□□□□ -0.91
SMPD4-201ENST00000351288 HRGP04196 525 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 SLC6A8P48029 635 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 GLO1Q04760 184 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 ST3GAL2Q16842 350 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 SLC25A25Q6KCM7 469 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 CPEB2Q7Z5Q1 589 aaKnown RBP9.39□□□□□ -0.91
SMPD4-201ENST00000351288 ZNF615Q8N8J6 731 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 OR7G1Q8NGA0 311 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 OR5D18Q8NGL1 313 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 RGP1Q92546 391 aaPredicted RBP9.39□□□□□ -0.91
SMPD4-201ENST00000351288 S100A13Q99584 98 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 GFI1Q99684 422 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 SEC22CQ9BRL7 303 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 ATG5Q9H1Y0 275 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 CLDN16Q9Y5I7 305 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 PKDREJQ9NTG1 2253 aa9.39□□□□□ -0.91
SMPD4-201ENST00000351288 TRAV18A0A075B6X5 111 aa9.38□□□□□ -0.91
SMPD4-201ENST00000351288 TRABD2BA6NFA1 517 aa9.38□□□□□ -0.91
SMPD4-201ENST00000351288 SHISA7A6NL88 538 aa9.38□□□□□ -0.91
SMPD4-201ENST00000351288 NOTOA8MTQ0 251 aa9.38□□□□□ -0.91
SMPD4-201ENST00000351288 ZNHIT1O43257 154 aa9.38□□□□□ -0.91
SMPD4-201ENST00000351288 CDAP32320 146 aa9.38□□□□□ -0.91
SMPD4-201ENST00000351288 FOLR3P41439 243 aa9.38□□□□□ -0.91
SMPD4-201ENST00000351288 DUSP3P51452 185 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms