RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 ZNF74Q16587 644 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 ACER2Q5QJU3 275 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 RTL4Q6ZR62 310 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 ZNF767PQ75MW2 155 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 GRINAQ7Z429 371 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 DTX1Q86Y01 620 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 BEST3Q8N1M1 668 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 C9orf62Q8N4C0 152 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 ADAMTS17Q8TE56 1095 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 RNF138Q8WVD3 245 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 TTTY10Q9BZA0 68 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 DPAGT1Q9H3H5 408 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 TMEM185BQ9H7F4 350 aa12.07□□□□□ -0.48
UBA3-201ENST00000349511 A0A1W2PRG6 482 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 PROB1E7EW31 1015 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 IMPA2O14732 288 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 F13BP05160 661 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 PEPDP12955 493 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 ZNF3P17036 446 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 PYCR1P32322 319 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 GPR85P60893 370 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 OC90Q02509 493 aaPredicted RBP12.06□□□□□ -0.48
UBA3-201ENST00000349511 C19orf57Q0VDD7 668 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 RNASE12Q5GAN4 147 aaKnown RBP12.06□□□□□ -0.48
UBA3-201ENST00000349511 DCAF10Q5QP82 559 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 SLC22A10Q63ZE4 541 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 LYPD4Q6UWN0 246 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 RFLNBQ8N5W9 214 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 ADAMTS14Q8WXS8 1223 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 GHSRQ92847 366 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 PHF21AQ96BD5 680 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 SCMH1Q96GD3 660 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 ERMAPQ96PL5 475 aaPredicted RBP12.06□□□□□ -0.48
UBA3-201ENST00000349511 PROK2Q9HC23 129 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 HAO2Q9NYQ3 351 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 STMN3Q9NZ72 180 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 ST6GALNAC2Q9UJ37 374 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 CLEC4AQ9UMR7 237 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 RPH3AQ9Y2J0 694 aaPredicted RBP12.06□□□□□ -0.48
UBA3-201ENST00000349511 ZNF337Q9Y3M9 751 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 IER3IP1Q9Y5U9 82 aa12.06□□□□□ -0.48
UBA3-201ENST00000349511 A0A1W2PPK0 400 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 DCDC2BA2VCK2 349 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 C7orf66A4D0T2 115 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 NDUFB2O95178 105 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 CD3GP09693 182 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 ZNF41P51814 821 aaPredicted RBP12.05□□□□□ -0.48
UBA3-201ENST00000349511 HCCSP53701 268 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 ERVK-25P63136 954 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 NHLH1Q02575 133 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 HACD4Q5VWC8 232 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 SPINK14Q6IE38 97 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 TEX19Q8NA77 164 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 OR4K17Q8NGC6 315 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 OR11H7Q8NGC8 314 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 OR4K13Q8NH42 304 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 TMEM234Q8WY98 164 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 ARL5BQ96KC2 179 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 CITED4Q96RK1 184 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 SLC19A3Q9BZV2 496 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.05□□□□□ -0.48
UBA3-201ENST00000349511 GHITMQ9H3K2 345 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 SDHAF3Q9NRP4 125 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 NUDT15Q9NV35 164 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 SLC23A1Q9UHI7 598 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 PRRC2CQ9Y520 2896 aaKnown RBP12.05□□□□□ -0.48
UBA3-201ENST00000349511 BOD1L1Q8NFC6 3051 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 A0A0G2JMM0 328 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 A0A1W2PPB8 328 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 A0A1W2PRS3 328 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 KIR3DP1A8MWS1 328 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.05□□□□□ -0.48
UBA3-201ENST00000349511 C11orf98E9PRG8 122 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 MAGEB4O15481 346 aaPredicted RBP12.05□□□□□ -0.48
UBA3-201ENST00000349511 TCRBP04435 133 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 SNRPBP14678 240 aaKnown RBP12.05□□□□□ -0.48
UBA3-201ENST00000349511 DNASE1L1P49184 302 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 ACTC1P68032 377 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 ACTA1P68133 377 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 TP53I3Q53FA7 332 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 LINC00696Q6ZRV3 163 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 TMPRSS7Q7RTY8 843 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 TOMM5Q8N4H5 51 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 MS4A15Q8N5U1 240 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 SDR9C7Q8NEX9 313 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 OR2M3Q8NG83 312 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 PAQR8Q8TEZ7 354 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 YIPF5Q969M3 257 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 SMAD5Q99717 465 aaKnown RBP12.05□□□□□ -0.48
UBA3-201ENST00000349511 SLCO1C1Q9NYB5 712 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 ZNF222Q9UK12 451 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 BAIAP2Q9UQB8 552 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 NUBP2Q9Y5Y2 271 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 DMXL2Q8TDJ6 3036 aa12.05□□□□□ -0.48
UBA3-201ENST00000349511 A0A0B4J203 849 aa12.04□□□□□ -0.48
UBA3-201ENST00000349511 EFNA2O43921 213 aa12.04□□□□□ -0.48
UBA3-201ENST00000349511 TSC22D2O75157 780 aa12.04□□□□□ -0.48
UBA3-201ENST00000349511 HIST1H1CP16403 213 aaKnown RBP12.04□□□□□ -0.48
UBA3-201ENST00000349511 ATF1P18846 271 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms