RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 U3KQ87 197 aa12.55□□□□□ -0.4
TRIM4-201ENST00000349062 FZD7O75084 574 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 CTLA4P16410 223 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 DNASE1P24855 282 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 PER3P56645 1201 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 FOXF1Q12946 379 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 FAAP20Q6NZ36 180 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 CD200R1LQ6Q8B3 271 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 IDO2Q6ZQW0 420 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 SAP25Q8TEE9 199 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 NKD1Q969G9 470 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 NXPE2Q96DL1 559 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 ZNF768Q9H5H4 540 aaKnown RBP12.54□□□□□ -0.4
TRIM4-201ENST00000349062 SLCO1C1Q9NYB5 712 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 GPN3Q9UHW5 284 aaPredicted RBP12.54□□□□□ -0.4
TRIM4-201ENST00000349062 ST6GALNAC2Q9UJ37 374 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 PCDHGB7Q9Y5F8 929 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 PLPP2O43688 288 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 TSPAN2O60636 221 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 SLC43A1O75387 559 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 ACTA2P62736 377 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 ACTG2P63267 376 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 HBMQ6B0K9 141 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 RHBDD2Q6NTF9 364 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 COMMD2Q86X83 199 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 OR2T35Q8NGX2 323 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 OR5AK2Q8NH90 309 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 SMIM19Q96E16 107 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 OR5B2Q96R09 309 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 SEMA4CQ9C0C4 833 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRIM4-201ENST00000349062 TAS2R5Q9NYW4 299 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 SRPK3Q9UPE1 567 aa12.54□□□□□ -0.4
TRIM4-201ENST00000349062 ZFHX2Q9C0A1 2572 aaPredicted RBP12.54□□□□□ -0.4
TRIM4-201ENST00000349062 BLACEA4D250 179 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 GATBO75879 557 aaKnown RBP12.53□□□□□ -0.4
TRIM4-201ENST00000349062 P2RX1P51575 399 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 DGCR2P98153 550 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 TLE3Q04726 772 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 POU4F2Q12837 409 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 ANGPT1Q15389 498 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 DMKNQ6E0U4 476 aaPredicted RBP12.53□□□□□ -0.4
TRIM4-201ENST00000349062 KRT77Q7Z794 578 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 SLITRK4Q8IW52 837 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 APCDD1LQ8NCL9 501 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 OR11H7Q8NGC8 314 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 INTS14Q96SY0 518 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 MARVELD1Q9BSK0 173 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 AUNIPQ9H7T9 357 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 B3GNT2Q9NY97 397 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 LOC400499M0QZD8 3231 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 TRAV36DV7A0A075B6V5 113 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 A0A1B0GTQ1 180 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 PMS2P1A4D2B8 440 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 ALG1L2C9J202 215 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 NPIPA5E9PKD4 350 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 ATP6V1G2-DDX39BF2Z307 99 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 H3BUI4 141 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 WNT11O96014 354 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 OTX2P32243 289 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 CAMK2DQ13557 499 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 FNDC7Q5VTL7 733 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 WDR74Q6RFH5 385 aaPredicted RBP12.53□□□□□ -0.4
TRIM4-201ENST00000349062 PMM1Q92871 262 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 CLDN23Q96B33 292 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 DUSP23Q9BVJ7 150 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 CACNG6Q9BXT2 260 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 MRM2Q9UI43 246 aaKnown RBP12.53□□□□□ -0.4
TRIM4-201ENST00000349062 NPIPA1Q9UND3 350 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 HIF3AQ9Y2N7 669 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 MT-ND4P03905 459 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 ASAH2BP0C7U1 165 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 ANXA3P12429 323 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 TAS2R43P59537 309 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 EXOSC2Q13868 293 aaKnown RBP12.53□□□□□ -0.4
TRIM4-201ENST00000349062 LINC01590Q5TEZ4 76 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 POMGNT2Q8NAT1 580 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 HOXB13Q92826 284 aaPredicted RBP12.53□□□□□ -0.4
TRIM4-201ENST00000349062 TMEM106AQ96A25 262 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 ISYNA1Q9NPH2 558 aa12.53□□□□□ -0.4
TRIM4-201ENST00000349062 IGHV3-15A0A0B4J1V0 119 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 SRMP19623 302 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 KLK2P20151 261 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 MTNR1BP49286 362 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 POLR2HP52434 150 aaKnown RBP12.52□□□□□ -0.4
TRIM4-201ENST00000349062 FAM69AQ5T7M9 428 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 PMS2CLQ68D20 193 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 EML6Q6ZMW3 1958 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 FTMTQ8N4E7 242 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 TOMM5Q8N4H5 51 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 MS4A15Q8N5U1 240 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 OR51J1Q9H342 316 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 FBXL2Q9UKC9 423 aa12.52□□□□□ -0.4
TRIM4-201ENST00000349062 EML5Q05BV3 1969 aa12.52□□□□□ -0.41
TRIM4-201ENST00000349062 ANXA2P2A6NMY6 339 aa12.52□□□□□ -0.41
TRIM4-201ENST00000349062 ARL6IP5O75915 188 aa12.52□□□□□ -0.41
TRIM4-201ENST00000349062 KLK3P07288 261 aaPredicted RBP12.52□□□□□ -0.41
TRIM4-201ENST00000349062 ANXA2P07355 339 aaKnown RBP12.52□□□□□ -0.41
TRIM4-201ENST00000349062 SLC2A1P11166 492 aa12.52□□□□□ -0.41
TRIM4-201ENST00000349062 AP2S1P53680 142 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms