RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 NAXEQ8NCW5 288 aa23.91■■□□□ 1.42
SSBP4-202ENST00000348495 GGHQ92820 318 aa23.91■■□□□ 1.42
SSBP4-202ENST00000348495 PHF3Q92576 2039 aaKnown RBP23.91■■□□□ 1.42
SSBP4-202ENST00000348495 KHDRBS3O75525 346 aaKnown RBP23.9■■□□□ 1.42
SSBP4-202ENST00000348495 OR3A2P47893 321 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 PER3P56645 1201 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 RPS7P62081 194 aaKnown RBP23.9■■□□□ 1.42
SSBP4-202ENST00000348495 GGTLC2Q14390 218 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 LINGO2Q7L985 606 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 OR6K3Q8NGY3 331 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 DUSP21Q9H596 190 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 RERGLQ9H628 205 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 PAK1IP1Q9NWT1 392 aaPredicted RBP23.9■■□□□ 1.42
SSBP4-202ENST00000348495 SCN3BQ9NY72 215 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 COA3Q9Y2R0 106 aaPredicted RBP23.9■■□□□ 1.42
SSBP4-202ENST00000348495 IL2RAP01589 272 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 CA7P43166 264 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 SLC35A2P78381 396 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 KCTD21Q4G0X4 260 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 ZNF100Q8IYN0 542 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 ZMYND19Q96E35 227 aaPredicted RBP23.9■■□□□ 1.42
SSBP4-202ENST00000348495 RNFT2Q96EX2 444 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 ULBP2Q9BZM5 246 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 C12orf49Q9H741 205 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 SLC7A10Q9NS82 523 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 TPRKBQ9Y3C4 175 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 UGT2A1Q9Y4X1 527 aa23.9■■□□□ 1.42
SSBP4-202ENST00000348495 CFAP46Q8IYW2 2715 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 TNFAIP8O95379 198 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 TMIGD3P0DMS9 266 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-202ENST00000348495 PIPP12273 146 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-202ENST00000348495 CENPAP49450 140 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 SIRPAP78324 504 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 LCN1P1Q5VSP4 162 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 LYPD4Q6UWN0 246 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 GPR137CQ8N3F9 429 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 POMGNT2Q8NAT1 580 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 OR6K6Q8NGW6 343 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 NSMAFQ92636 917 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 ALKBH3Q96Q83 286 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-202ENST00000348495 DMRTA2Q96SC8 542 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 CNOT2Q9NZN8 540 aaKnown RBP23.89■■□□□ 1.41
SSBP4-202ENST00000348495 SH3BGRL2Q9UJC5 107 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 BLOC1S6Q9UL45 172 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 FREM1Q5H8C1 2179 aa23.89■■□□□ 1.41
SSBP4-202ENST00000348495 E9PLN8 166 aa23.88■■□□□ 1.41
SSBP4-202ENST00000348495 GLO1Q04760 184 aa23.88■■□□□ 1.41
SSBP4-202ENST00000348495 VWA1Q6PCB0 445 aa23.88■■□□□ 1.41
SSBP4-202ENST00000348495 TFAP2EQ6VUC0 442 aa23.88■■□□□ 1.41
SSBP4-202ENST00000348495 CNEP1R1Q8N9A8 125 aa23.88■■□□□ 1.41
SSBP4-202ENST00000348495 SGCDQ92629 289 aa23.88■■□□□ 1.41
SSBP4-202ENST00000348495 LGALS12Q96DT0 336 aa23.88■■□□□ 1.41
SSBP4-202ENST00000348495 VKORC1Q9BQB6 163 aa23.88■■□□□ 1.41
SSBP4-202ENST00000348495 MARCH7Q9H992 704 aa23.88■■□□□ 1.41
SSBP4-202ENST00000348495 CRLF2Q9HC73 371 aa23.88■■□□□ 1.41
SSBP4-202ENST00000348495 B3GAT2Q9NPZ5 323 aa23.88■■□□□ 1.41
SSBP4-202ENST00000348495 EFCAB10A6NFE3 127 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 RPL36A-HNRNPH2H7BZ11 118 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 DHHO43323 396 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 IGHV3-9P01782 118 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 BLVRAP53004 296 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 CASP6P55212 293 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 PMPCAQ10713 525 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 RAB40BQ12829 278 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 GLB1L2Q8IW92 636 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 ZNF511Q8NB15 262 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 ZNF540Q8NDQ6 660 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 STARD4Q96DR4 205 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 ZNF837Q96EG3 531 aaPredicted RBP23.87■■□□□ 1.41
SSBP4-202ENST00000348495 ZNF696Q9H7X3 374 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 ADGRL4Q9HBW9 690 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 GPR35Q9HC97 309 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 MALT1Q9UDY8 824 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 PRSS50Q9UI38 385 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 EXOGQ9Y2C4 368 aaKnown RBP23.87■■□□□ 1.41
SSBP4-202ENST00000348495 TRGV8A0A0C4DH27 118 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 PTGES3LE9PB15 166 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 GPANK1O95872 356 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 CGAP01215 116 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 LYNP07948 512 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 STSP08842 583 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 GAAP10253 952 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 GABARAPL2P60520 117 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 MRPL49Q13405 166 aaKnown RBP23.87■■□□□ 1.41
SSBP4-202ENST00000348495 FOXL2NBQ6ZUU3 175 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 AHSA2Q719I0 299 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 SLC26A10Q8NG04 563 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 IPCEF1Q8WWN9 437 aaPredicted RBP23.87■■□□□ 1.41
SSBP4-202ENST00000348495 SIGLEC11Q96RL6 698 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 PLSCR4Q9NRQ2 329 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 MRPL22Q9NWU5 206 aaKnown RBP23.87■■□□□ 1.41
SSBP4-202ENST00000348495 OSGIN2Q9Y236 505 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 MEMO1Q9Y316 297 aa23.87■■□□□ 1.41
SSBP4-202ENST00000348495 J3QRE1 110 aa23.86■■□□□ 1.41
SSBP4-202ENST00000348495 TFP02787 698 aa23.86■■□□□ 1.41
SSBP4-202ENST00000348495 STK11Q15831 433 aa23.86■■□□□ 1.41
SSBP4-202ENST00000348495 KLHL22Q53GT1 634 aa23.86■■□□□ 1.41
SSBP4-202ENST00000348495 FBXW9Q5XUX1 488 aa23.86■■□□□ 1.41
SSBP4-202ENST00000348495 BTLAQ7Z6A9 289 aa23.86■■□□□ 1.41
SSBP4-202ENST00000348495 TIGD4Q8IY51 512 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms