RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ZNF808Q8N4W9 903 aaPredicted RBP16.06■□□□□ 0.16
SPAST-202ENST00000345662 OR5D18Q8NGL1 313 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 MEIKINA0A087WXM9 373 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 LOC102725191A0A1B0GVB3 256 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 TGOLN2O43493 480 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 DOK2O60496 412 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 PVRP15151 417 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 DPP4P27487 766 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 DCAF7P61962 342 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 RAB11AP62491 216 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 CDK5R1Q15078 307 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 BPHLQ86WA6 291 aaPredicted RBP16.06■□□□□ 0.16
SPAST-202ENST00000345662 C12orf76Q8N812 135 aaPredicted RBP16.06■□□□□ 0.16
SPAST-202ENST00000345662 LRFN5Q96NI6 719 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 B3GALT5Q9Y2C3 310 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 TRAV36DV7A0A075B6V5 113 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 ZNF724A8MTY0 619 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 H0YGG7 62 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 BET1O15155 118 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 C5orf46Q6UWT4 87 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 USP53Q70EK8 1073 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 ANKRD9Q96BM1 317 aaPredicted RBP16.05■□□□□ 0.16
SPAST-202ENST00000345662 PLCH1Q4KWH8 1693 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 ARGFXA6NJG6 315 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 HRO43593 1189 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 SUSD5O60279 629 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 KLKB1P03952 638 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 IL5P05113 134 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 CTSAP10619 480 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 NME1P15531 152 aaKnown RBP16.05■□□□□ 0.16
SPAST-202ENST00000345662 F2RL1P55085 397 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 RNF4P78317 190 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 TAF9Q16594 264 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 SHEQ5VZ18 495 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 FJX1Q86VR8 437 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 SIRT5Q9NXA8 310 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 ZFP92A6NM28 416 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 C17orf112F2Z3M2 114 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 EPXP11678 715 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 CSNK1G2P78368 415 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 CAMK2BQ13554 666 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 BRICD5Q6PL45 260 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 GLDNQ6ZMI3 551 aaPredicted RBP16.05■□□□□ 0.16
SPAST-202ENST00000345662 TAS1R1Q7RTX1 841 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 ZNF439Q8NDP4 499 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 OR51A4Q8NGJ6 313 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 SECTM1Q8WVN6 248 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 STRAPQ9Y3F4 350 aaKnown RBP16.05■□□□□ 0.16
SPAST-202ENST00000345662 AQP8O94778 261 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 CD3DP04234 171 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 CRYBB2P43320 205 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 ANGPTL5Q86XS5 388 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 TXN2Q99757 166 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 MARVELD1Q9BSK0 173 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 SLC46A2Q9BY10 475 aa16.05■□□□□ 0.16
SPAST-202ENST00000345662 ST8SIA3O43173 380 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 PTAFRP25105 342 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 LINC00303Q3SY05 128 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 TMEM71Q6P5X7 295 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 GLIPR1L1Q6UWM5 242 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 MOB3CQ70IA8 216 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 ZNF595Q8IYB9 648 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 UHRF2Q96PU4 802 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 SGPP1Q9BX95 441 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 C11orf49Q9H6J7 331 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 BCKDHBP21953 392 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 SMAD2Q15796 467 aaKnown RBP16.04■□□□□ 0.16
SPAST-202ENST00000345662 CLEC1AQ8NC01 280 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 OR1S2Q8NGQ3 325 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 DCBLD2Q96PD2 775 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 GAR1Q9NY12 217 aaKnown RBP16.04■□□□□ 0.16
SPAST-202ENST00000345662 CACNA1SQ13698 1873 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 AKAP11Q9UKA4 1901 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 C20orf202A1L168 122 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 P04436 131 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 RAG2P55895 527 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 NTHL1P78549 312 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 TESK1Q15569 626 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 TMEM182Q6ZP80 229 aaPredicted RBP16.04■□□□□ 0.16
SPAST-202ENST00000345662 OR52B4Q8NGK2 314 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 ISG20L2Q9H9L3 353 aaKnown RBP16.04■□□□□ 0.16
SPAST-202ENST00000345662 TRAV1-2A0A0B4J238 106 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 DSCR3O14972 297 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 TMEM127O75204 238 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 FABP1P07148 127 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 NID1P14543 1247 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 CSF2RAP15509 400 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 PRPH2P23942 346 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 MSX1P28360 303 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 PSMB3P49720 205 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 SNRPNP63162 240 aaKnown RBP16.04■□□□□ 0.16
SPAST-202ENST00000345662 DOC2BQ14184 412 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 SLC25A35Q3KQZ1 300 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 SKA3Q8IX90 412 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 OR2L13Q8N349 312 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 GALNT16Q8N428 558 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 PPP1R1CQ8WVI7 109 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 CLDND1Q9NY35 253 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 KLK11Q9UBX7 282 aa16.04■□□□□ 0.16
SPAST-202ENST00000345662 KIR2DS5A0A0G2JLQ3 304 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms