RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 DEPDC4Q8N2C3 294 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 ADPRHL1Q8NDY3 354 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 SDR9C7Q8NEX9 313 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 ANKK1Q8NFD2 765 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 OR52E2Q8NGJ4 325 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 OR4K13Q8NH42 304 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 CNIH3Q8TBE1 160 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 GPX7Q96SL4 187 aaPredicted RBP12.15□□□□□ -0.46
TPM4-202ENST00000344824 PRRG3Q9BZD7 231 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 NRIP3Q9NQ35 241 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 GRHPRQ9UBQ7 328 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 ST6GALNAC2Q9UJ37 374 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 ZNF346Q9UL40 294 aaKnown RBP12.15□□□□□ -0.46
TPM4-202ENST00000344824 BAIAP2Q9UQB8 552 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 RASD1Q9Y272 281 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 FLVCR1Q9Y5Y0 555 aa12.15□□□□□ -0.46
TPM4-202ENST00000344824 HEATR1Q9H583 2144 aaKnown RBP12.14□□□□□ -0.47
TPM4-202ENST00000344824 CELSR1Q9NYQ6 3014 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.14□□□□□ -0.47
TPM4-202ENST00000344824 A0A1W2PPR1 153 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 CIB4A0PJX0 185 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 DEFB108AA8MXU0 73 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 H7C1C5 153 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 SURF4O15260 269 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 TLX2O43763 284 aaPredicted RBP12.14□□□□□ -0.47
TPM4-202ENST00000344824 THBDP07204 575 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 IFNGR1P15260 489 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 HIST1H1CP16403 213 aaKnown RBP12.14□□□□□ -0.47
TPM4-202ENST00000344824 ZNF43P17038 809 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 ACVR1BP36896 505 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 PCYT1AP49585 367 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 ART1P52961 327 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 SLC16A1P53985 500 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 LCN6P62502 163 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.14□□□□□ -0.47
TPM4-202ENST00000344824 CD47Q08722 323 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 DBPQ10586 325 aaPredicted RBP12.14□□□□□ -0.47
TPM4-202ENST00000344824 ITGADQ13349 1161 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 KRR1Q13601 381 aaKnown RBP12.14□□□□□ -0.47
TPM4-202ENST00000344824 MAD2L1BPQ15013 274 aaPredicted RBP12.14□□□□□ -0.47
TPM4-202ENST00000344824 PDK3Q15120 406 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 ACKR1Q16570 336 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 PAMR1Q6UXH9 720 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 SLC35D2Q76EJ3 337 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 BCDIN3DQ7Z5W3 292 aaKnown RBP12.14□□□□□ -0.47
TPM4-202ENST00000344824 JAZF1Q86VZ6 243 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 CYB561A3Q8NBI2 242 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 OR9K2Q8NGE7 335 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 TXNDC15Q96J42 360 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 OXGR1Q96P68 337 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 HS3ST6Q96QI5 342 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 FN3KQ9H479 309 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 MED29Q9NX70 200 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 UBAP1Q9NZ09 502 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 B3GAT1Q9P2W7 334 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 UPB1Q9UBR1 384 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 LRCH1Q9Y2L9 728 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 F8P00451 2351 aa12.14□□□□□ -0.47
TPM4-202ENST00000344824 TEP1Q99973 2627 aaKnown RBP12.13□□□□□ -0.47
TPM4-202ENST00000344824 FAM183AA6NL82 134 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 RIIAD1A6NNX1 92 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 IMPA2O14732 288 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 BCL10O95999 233 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 IFNGP01579 166 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 IGHV1-2P23083 117 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 SDHAP31040 664 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 FMO3P31513 532 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 BIDP55957 195 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 RPL27P61353 136 aaKnown RBP12.13□□□□□ -0.47
TPM4-202ENST00000344824 H3F3AP84243 136 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 FAPQ12884 760 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 SLC17A1Q14916 467 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 BEX5Q5H9J7 111 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 FBXW9Q5XUX1 488 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 LEG1Q6P5S2 330 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 FAM122BQ7Z309 247 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 PXKQ7Z7A4 578 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 PLPPR2Q96GM1 343 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 ZNF385AQ96PM9 386 aaKnown RBP12.13□□□□□ -0.47
TPM4-202ENST00000344824 EMC6Q9BV81 110 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 TXNIPQ9H3M7 391 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 MED20Q9H944 212 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 CMC2Q9NRP2 79 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 DNAJC27Q9NZQ0 273 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 EDARQ9UNE0 448 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 NOX1Q9Y5S8 564 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 RAI1Q7Z5J4 1906 aaPredicted RBP12.13□□□□□ -0.47
TPM4-202ENST00000344824 CADP27708 2225 aa12.13□□□□□ -0.47
TPM4-202ENST00000344824 MAP1AP78559 2803 aaPredicted RBP12.13□□□□□ -0.47
TPM4-202ENST00000344824 XKRYO14609 159 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 ARPC3O15145 178 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 ARHGEF9O43307 516 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 TRAF3IP2O43734 574 aaPredicted RBP12.12□□□□□ -0.47
TPM4-202ENST00000344824 KRT33AO76009 404 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 RAF1P04049 648 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 ZNF3P17036 446 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 DAP3P51398 398 aaKnown RBP12.12□□□□□ -0.47
TPM4-202ENST00000344824 CLDN17P56750 224 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 ISL1P61371 349 aa12.12□□□□□ -0.47
TPM4-202ENST00000344824 CRMP1Q14194 572 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms