RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 DVL1P1P54792 670 aaPredicted RBP10.69□□□□□ -0.7
SGCA-202ENST00000344627 MRPS11P82912 194 aaKnown RBP10.69□□□□□ -0.7
SGCA-202ENST00000344627 LAPTM4AQ15012 233 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 CR1LQ2VPA4 569 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 CGB2Q6NT52 195 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 HDDC2Q7Z4H3 204 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 MICU2Q8IYU8 434 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 LRRC18Q8N456 261 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 OR4K5Q8NGD3 323 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 LZICQ8WZA0 190 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 MCHR2Q969V1 340 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 MRPL24Q96A35 216 aaKnown RBP10.69□□□□□ -0.7
SGCA-202ENST00000344627 ZNF426Q9BUY5 554 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 POLR2J2Q9GZM3 115 aaKnown RBP10.69□□□□□ -0.7
SGCA-202ENST00000344627 POLR2J3Q9H1A7 115 aaKnown RBP10.69□□□□□ -0.7
SGCA-202ENST00000344627 KCNN2Q9H2S1 579 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 CDH20Q9HBT6 801 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 TMEM38BQ9NVV0 291 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 ZNF224Q9NZL3 707 aa10.69□□□□□ -0.7
SGCA-202ENST00000344627 TMEFF2Q9UIK5 374 aaPredicted RBP10.69□□□□□ -0.7
SGCA-202ENST00000344627 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.68□□□□□ -0.7
SGCA-202ENST00000344627 IQCMA0A1B0GVH7 501 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 SLC22A23A1A5C7 686 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 LRP5LA4QPB2 252 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 B4DSR2 109 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 LYNX1G3V0Z9 82 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 MGRN1O60291 552 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 TRMUO75648 421 aaKnown RBP10.68□□□□□ -0.7
SGCA-202ENST00000344627 PTHP01270 115 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 FAM157BP0CG42 384 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 LYNX1P0DP58 116 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 CCL2P13500 99 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 SELENOVP59797 346 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 HSF2Q03933 536 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 PLP2Q04941 152 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 RUNX1T1Q06455 604 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 CD47Q08722 323 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 ST3GAL3Q11203 375 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 TOP3AQ13472 1001 aaPredicted RBP10.68□□□□□ -0.7
SGCA-202ENST00000344627 RIN1Q13671 783 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 MAD2L1BPQ15013 274 aaPredicted RBP10.68□□□□□ -0.7
SGCA-202ENST00000344627 SGCAQ16586 387 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 ALKBH6Q3KRA9 238 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 SLC36A2Q495M3 483 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 IL17RELQ6ZVW7 336 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 DPPA2Q7Z7J5 298 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 LRP11Q86VZ4 500 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 ARIH2OSQ8N7S6 290 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 ICA1LQ8NDH6 482 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 RBM15BQ8NDT2 890 aaKnown RBP10.68□□□□□ -0.7
SGCA-202ENST00000344627 SLC30A7Q8NEW0 376 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 NOXO1Q8NFA2 376 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 MOSPD2Q8NHP6 518 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 ASB10Q8WXI3 467 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 ZNF75AQ96N20 296 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 SNX18Q96RF0 628 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 LRMDAQ9H2I8 198 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 MED4Q9NPJ6 270 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 C20orf141Q9NUB4 165 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 ZNF446Q9NWS9 450 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 SLC7A8Q9UHI5 535 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 GPR160Q9UJ42 338 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 AP3M1Q9Y2T2 418 aa10.68□□□□□ -0.7
SGCA-202ENST00000344627 PIP5K1CO60331 668 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 ZNF682O95780 498 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 TFP02787 698 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 LCKP06239 509 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 THRBP10828 461 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 IFI30P13284 250 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 ANPEPP15144 967 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 CCNOP22674 350 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 APEX1P27695 318 aaKnown RBP10.67□□□□□ -0.7
SGCA-202ENST00000344627 SRP14P37108 136 aaKnown RBP10.67□□□□□ -0.7
SGCA-202ENST00000344627 SEC24CP53992 1094 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 CDH15P55291 814 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 TMEM33P57088 247 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 SELENOWP63302 87 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 NKPD1Q17RQ9 610 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 MSMPQ1L6U9 139 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 TBC1D28Q2M2D7 210 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 RGS7BPQ6MZT1 257 aaPredicted RBP10.67□□□□□ -0.7
SGCA-202ENST00000344627 MEX3DQ86XN8 651 aaKnown RBP10.67□□□□□ -0.7
SGCA-202ENST00000344627 OR1J2Q8NGS2 313 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 NSMAFQ92636 917 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 FNDC11Q9BVV2 318 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 C1orf198Q9H425 327 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 CCNB1IP1Q9NPC3 277 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 GMPR2Q9P2T1 348 aaKnown RBP10.67□□□□□ -0.7
SGCA-202ENST00000344627 STX18Q9P2W9 335 aaKnown RBP10.67□□□□□ -0.7
SGCA-202ENST00000344627 RHCGQ9UBD6 479 aa10.67□□□□□ -0.7
SGCA-202ENST00000344627 ZNF346Q9UL40 294 aaKnown RBP10.67□□□□□ -0.7
SGCA-202ENST00000344627 CCDC22O60826 627 aa10.66□□□□□ -0.7
SGCA-202ENST00000344627 LILRA1O75019 489 aa10.66□□□□□ -0.7
SGCA-202ENST00000344627 SLC2A10O95528 541 aa10.66□□□□□ -0.7
SGCA-202ENST00000344627 SAGP10523 405 aaPredicted RBP10.66□□□□□ -0.7
SGCA-202ENST00000344627 NAT2P11245 290 aa10.66□□□□□ -0.7
SGCA-202ENST00000344627 COX4I1P13073 169 aa10.66□□□□□ -0.7
SGCA-202ENST00000344627 ACHEP22303 614 aa10.66□□□□□ -0.7
SGCA-202ENST00000344627 CDAP32320 146 aa10.66□□□□□ -0.7
SGCA-202ENST00000344627 APLNRP35414 380 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms