RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 TMPRSS7Q7RTY8 843 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 GGNQ86UU5 652 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 SULF2Q8IWU5 870 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 UBQLNLQ8IYU4 475 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 CLEC1AQ8NC01 280 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 OR2M7Q8NG81 312 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 OTOSQ8NHW6 89 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 RGP1Q92546 391 aaPredicted RBP12.11□□□□□ -0.47
CDC42-202ENST00000344548 ZNF775Q96BV0 537 aaPredicted RBP12.11□□□□□ -0.47
CDC42-202ENST00000344548 PRRX2Q99811 253 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 UTP23Q9BRU9 249 aaKnown RBP12.11□□□□□ -0.47
CDC42-202ENST00000344548 LAMP5Q9UJQ1 280 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 TRAPPC4Q9Y296 219 aa12.11□□□□□ -0.47
CDC42-202ENST00000344548 ZNF407Q9C0G0 2248 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 SPARCP09486 303 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 EDNRAP25101 427 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 GDI2P50395 445 aaKnown RBP12.1□□□□□ -0.47
CDC42-202ENST00000344548 RAC1P63000 192 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 LRRN1Q6UXK5 716 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 UEVLDQ8IX04 471 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 GALNT16Q8N428 558 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 SLC26A10Q8NG04 563 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 PPP1R14AQ96A00 147 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 SMIM19Q96E16 107 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 MAP6Q96JE9 813 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 ZNF385AQ96PM9 386 aaKnown RBP12.1□□□□□ -0.47
CDC42-202ENST00000344548 PIGQQ9BRB3 760 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 RNF32Q9H0A6 362 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 ZFP64Q9NPA5 681 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 TEKT2Q9UIF3 430 aa12.1□□□□□ -0.47
CDC42-202ENST00000344548 TRBV2A0A0J9YWF9 115 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 NPIPB13A6NJU9 1138 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 NPIPB4C9JG80 1138 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 H3BSH0 61 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 SEC14L5O43304 696 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 RGS9O75916 674 aaPredicted RBP12.09□□□□□ -0.47
CDC42-202ENST00000344548 ZFPL1O95159 310 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 PMS2P2O95744 297 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 PGA4P0DJD7 388 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 PGA3P0DJD8 388 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 GDF1P27539 372 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 CALRP27797 417 aaKnown RBP12.09□□□□□ -0.47
CDC42-202ENST00000344548 NTF4P34130 210 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 RORCP51449 518 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 GBX2P52951 348 aaPredicted RBP12.09□□□□□ -0.47
CDC42-202ENST00000344548 ADAM8P78325 824 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 ZNF239Q16600 458 aaKnown RBP12.09□□□□□ -0.47
CDC42-202ENST00000344548 ACSM3Q53FZ2 586 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 CORO6Q6QEF8 472 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 CEACAM19Q7Z692 300 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 LINC00346Q8IVM7 164 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 ADPRHL1Q8NDY3 354 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 BORCS5Q969J3 196 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 FER1L6-AS2Q96M78 137 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 KLHL15Q96M94 604 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 OXGR1Q96P68 337 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 FRRS1LQ9P0K9 344 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 GSTK1Q9Y2Q3 226 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 BOD1L1Q8NFC6 3051 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 MGAQ8IWI9 3026 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 PRRC2CQ9Y520 2896 aaKnown RBP12.09□□□□□ -0.47
CDC42-202ENST00000344548 A6NIZ1 184 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 CASKO14936 926 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 GAAP10253 952 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 LIPCP11150 499 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 ZNF17P17021 662 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 CDAP32320 146 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 SOX6P35712 828 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 OR10A3P58181 314 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 RAP1BP61224 184 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 RAP1AP62834 184 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 SLC35A1P78382 337 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 PHYHD1Q5SRE7 291 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 GALNTL5Q7Z4T8 443 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 LAX1Q8IWV1 398 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 RPS4Y2Q8TD47 263 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 KIAA1143Q96AT1 154 aaPredicted RBP12.09□□□□□ -0.47
CDC42-202ENST00000344548 IKZF2Q9UKS7 526 aa12.09□□□□□ -0.47
CDC42-202ENST00000344548 DNAJC13O75165 2243 aa12.08□□□□□ -0.47
CDC42-202ENST00000344548 FAM166BA8MTA8 275 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 EIF1AYO14602 144 aaKnown RBP12.08□□□□□ -0.48
CDC42-202ENST00000344548 SMAD9O15198 467 aaKnown RBP12.08□□□□□ -0.48
CDC42-202ENST00000344548 PNPP00491 289 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 ZNF43P17038 809 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 CD82P27701 267 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 GFRA1P56159 465 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 TAS2R43P59537 309 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 HSF2Q03933 536 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 GLO1Q04760 184 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 RPL22L1Q6P5R6 122 aaKnown RBP12.08□□□□□ -0.48
CDC42-202ENST00000344548 LRFN4Q6PJG9 635 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 RDH10Q8IZV5 341 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 YIPF7Q8N8F6 280 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 OR14A2Q96R54 314 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 MED18Q9BUE0 208 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 ABHD6Q9BV23 337 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 FAM117AQ9C073 453 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 MIXL1Q9H2W2 232 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 ZNF552Q9H707 407 aaPredicted RBP12.08□□□□□ -0.48
CDC42-202ENST00000344548 ZNF703Q9H7S9 590 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms