RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ZNF787Q6DD87 383 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 DHRS13Q6UX07 377 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SPNS3Q6ZMD2 512 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF100Q8IYN0 542 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 LINC01599Q8WXQ3 324 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SLC35E1Q96K37 410 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ADAMTS5Q9UNA0 930 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 MCRIP1C9JLW8 97 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 HSD17B6O14756 317 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 VIPR1P32241 457 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 OR1S2Q8NGQ3 325 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 MZB1Q8WU39 189 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 GPR22Q99680 433 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SSUH2Q9Y2M2 353 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SIX1Q15475 284 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SMTNL2Q2TAL5 461 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 OR52W1Q6IF63 320 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 MYH15Q9Y2K3 1946 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 FBLL1A6NHQ2 334 aaKnown RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 HNRNPA2B1P22626 353 aaKnown RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 PRSS3P35030 304 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ACSF3Q4G176 576 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CXorf40AQ8TE69 158 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 APOBEC4Q8WW27 367 aaKnown RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 PLSCR4Q9NRQ2 329 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SHANK1Q9Y566 2161 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 HYKKA2RU49 373 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 POU3F2P20265 443 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 NRLP54845 237 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SUSD1Q6UWL2 747 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 GPR148Q8TDV2 347 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 BOD1Q96IK1 185 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 OR8B4Q96RC9 309 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 GPR87Q9BY21 358 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SEC61A2Q9H9S3 476 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 NDUFB11Q9NX14 153 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 AQP7O14520 342 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 FZD7O75084 574 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 APBA3O96018 575 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 TTRP02766 147 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ACP2P11117 423 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ATF1P18846 271 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CSN1S1P47710 185 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CCL7P80098 99 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 FZD2Q14332 565 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CATSPERDQ86XM0 798 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 OR51A4Q8NGJ6 313 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 HHIPQ96QV1 700 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ATG10Q9H0Y0 220 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 MOKQ9UQ07 419 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ENPP4Q9Y6X5 453 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 GLI2P10070 1586 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 IQGAP3Q86VI3 1631 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CASP6P55212 293 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 OR7A5Q15622 319 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM225Q6GV28 225 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 LRRC52Q8N7C0 313 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 HJURPQ8NCD3 748 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 LOC102723971A0A1B0GUV8 181 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 GPR37L1O60883 481 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SCGB1D2O95969 90 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 TCF24Q7RTU0 167 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF440Q8IYI8 595 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CMTM7Q96FZ5 175 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SEMA6BQ9H3T3 888 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SLC23A1Q9UHI7 598 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CTSAP10619 480 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 TACR3P29371 465 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF415Q09FC8 603 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 LILRA2Q8N149 483 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 WDTC1Q8N5D0 677 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 OR2AJ1Q8NGZ0 328 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 TRIB3Q96RU7 358 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 RNF19AQ9NV58 838 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SCN9AQ15858 1988 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 VEGFDO43915 354 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 PJVKQ0ZLH3 352 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ATAT1Q5SQI0 421 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 MARC1Q5VT66 337 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SMPDL3BQ92485 455 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 PSMB11A5LHX3 300 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SLC25A6P12236 298 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 GNB3P16520 340 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CYP2F1P24903 491 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 MC4RP32245 332 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 PTGFRP43088 359 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 UQCRFS1P47985 274 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CLDN12P56749 244 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF90Q03938 601 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 TEAD2Q15562 447 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 PRTGQ2VWP7 1150 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 NCR3LG1Q68D85 454 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 HIST1H2AAQ96QV6 131 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 SERGEFQ9UGK8 458 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM212A6NML5 194 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 RAB27BO00194 218 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 FGF1P05230 155 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 CTU2Q2VPK5 515 aaKnown RBP3.48□□□□□ -1.85
SYNE2-202ENST00000344113 HMGCLL1Q8TB92 370 aa3.48□□□□□ -1.85
SYNE2-202ENST00000344113 ASB17Q8WXJ9 295 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms