RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 FXYD4P59646 89 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM184AQ6ZMB5 413 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MISPQ8IVT2 679 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM99Q8N816 258 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 OR5L2Q8NGL0 311 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 FRZBQ92765 325 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 RBMXL1Q96E39 390 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 BORCS8Q96FH0 119 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 SLC17A5Q9NRA2 495 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 HAO2Q9NYQ3 351 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 LTBP1Q14766 1721 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 LILRB3O75022 631 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 RABIFP47224 123 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MECP2P51608 486 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 SPOCK1Q08629 439 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 FAAP20Q6NZ36 180 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 TOMM40LQ969M1 308 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MACROD1Q9BQ69 325 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 GAR1Q9NY12 217 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 DOCK4Q8N1I0 1966 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 PRSS38A1L453 326 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 SMIM6P0DI80 62 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 P2RX1P51575 399 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 DTWD2Q8NBA8 298 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF485Q8NCK3 441 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 KIR3DX1Q9H7L2 352 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 CXXC1Q9P0U4 656 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 FOXJ3Q9UPW0 622 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MYLKQ15746 1914 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 A0A1B0GV50 99 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 C7orf66A4D0T2 115 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MCRIP1C9JLW8 97 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 TBX19O60806 448 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 GZMMP51124 257 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 GPR85P60893 370 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MRPL58Q14197 206 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 LTB4RQ15722 352 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 SGCAQ16586 387 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 FBXW12Q6X9E4 464 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 PCDHB10Q9UN67 800 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 PPIL1Q9Y3C6 166 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 CBY1Q9Y3M2 126 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 RHBDD3Q9Y3P4 386 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 POMT1Q9Y6A1 747 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 A0A0A6YYD5 115 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 LRP5LA4QPB2 252 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 TTLL8A6PVC2 850 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 BRINP1O60477 761 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 GPR137BO60478 399 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 PMP2P02689 132 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 CTSAP10619 480 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 GABRA1P14867 456 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 DCTDP32321 178 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 PTGER1P34995 402 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 GPNMBQ14956 572 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 SLC9A3R2Q15599 337 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 FAM27D1Q5T7N8 215 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 RBMS3Q6XE24 437 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MEX3BQ6ZN04 569 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 TECPR1Q7Z6L1 1165 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MCEMP1Q8IX19 187 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 C1orf87Q8N0U7 546 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 TSACCQ96A04 125 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 NAA11Q9BSU3 229 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 NECAP2Q9NVZ3 263 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MED16Q9Y2X0 877 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 GREB1Q4ZG55 1949 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 KIR2DS5A0A0G2JLQ3 304 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 A0A0G2JNG1 304 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 FAM221BA6H8Z2 402 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 KIR2DS3K7RE56 304 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 HRO43593 1189 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 PCBP4P57723 403 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 KIR2DS5Q14953 304 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 DUSP5Q16690 384 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 COMTD1Q86VU5 262 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 SCMH1Q96GD3 660 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 JSRP1Q96MG2 331 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 TGM7Q96PF1 710 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 WDR77Q9BQA1 342 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 ZMAT3Q9HA38 289 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 GABRQQ9UN88 632 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 A0A1B0GWA3 101 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF16P17020 682 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 DUSP1P28562 367 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 EPHA4P54764 986 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 RAB38P57729 211 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF345Q14585 488 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 EXOSC7Q15024 291 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 DEFB115Q30KQ5 88 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 C17orf99Q6UX52 265 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 RELL2Q8NC24 303 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 BPIFCQ8NFQ6 507 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 OR13C5Q8NGS8 318 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 SENP5Q96HI0 755 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF442Q9H7R0 627 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 OR5K3A6NET4 321 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 SERPINA2P20848 420 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 NFYBP25208 207 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 SGCBQ16585 318 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms