RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ARL6IP5O75915 188 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 TACSTD2P09758 323 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 SSR4P51571 173 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 CSRP2Q16527 193 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 SLC25A53Q5H9E4 307 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 TIPARPQ7Z3E1 657 aaKnown RBP16.71■□□□□ 0.27
HOXA9-201ENST00000343483 SCAIQ8N9R8 606 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 UBASH3BQ8TF42 649 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 THEM6Q8WUY1 208 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 WACQ9BTA9 647 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 PTGES2Q9H7Z7 377 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 CHST11Q9NPF2 352 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 DDX28Q9NUL7 540 aaKnown RBP16.71■□□□□ 0.27
HOXA9-201ENST00000343483 VSX1Q9NZR4 365 aaPredicted RBP16.71■□□□□ 0.27
HOXA9-201ENST00000343483 MRM2Q9UI43 246 aaKnown RBP16.71■□□□□ 0.27
HOXA9-201ENST00000343483 ING1Q9UK53 422 aaPredicted RBP16.71■□□□□ 0.27
HOXA9-201ENST00000343483 TCFL5Q9UL49 500 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 RBMX2Q9Y388 322 aaKnown RBP16.71■□□□□ 0.27
HOXA9-201ENST00000343483 FKBP7Q9Y680 259 aa16.71■□□□□ 0.27
HOXA9-201ENST00000343483 A0A0B4J293 547 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 A0A1B0GVC2 190 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 SLC22A23A1A5C7 686 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 A6NIN4 97 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 LIPT2A6NK58 231 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 NPIPA5E9PKD4 350 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 CD1AP06126 327 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 IFNGR1P15260 489 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 CTLA4P16410 223 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 PITPNBP48739 271 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 MAP2K6P52564 334 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 NANOS3P60323 173 aaKnown RBP16.7■□□□□ 0.26
HOXA9-201ENST00000343483 RPS11P62280 158 aaKnown RBP eCLIP16.7■□□□□ 0.26
HOXA9-201ENST00000343483 POU3F1Q03052 451 aaPredicted RBP16.7■□□□□ 0.26
HOXA9-201ENST00000343483 C19orf57Q0VDD7 668 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 MYBPHQ13203 477 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 RPS19BP1Q86WX3 136 aaKnown RBP16.7■□□□□ 0.26
HOXA9-201ENST00000343483 TMEM156Q8N614 296 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 CT55Q8WUE5 264 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 HSD17B8Q92506 261 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 OR14A2Q96R54 314 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 TAAR9Q96RI9 348 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 ZPBPQ9BS86 351 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 NPIPA1Q9UND3 350 aa16.7■□□□□ 0.26
HOXA9-201ENST00000343483 GATBO75879 557 aaKnown RBP16.69■□□□□ 0.26
HOXA9-201ENST00000343483 IGHEP01854 428 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 UCHL1P09936 223 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 HOXD11P31277 338 aaPredicted RBP16.69■□□□□ 0.26
HOXA9-201ENST00000343483 SNTA1Q13424 505 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 ETFDHQ16134 617 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 LIPNQ5VXI9 398 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 C3orf33Q6P1S2 294 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 KCTD20Q7Z5Y7 419 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 SYT9Q86SS6 491 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 DUSP18Q8NEJ0 188 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 SNX18Q96RF0 628 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 POTEKPQ9BYX7 375 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 ALKBH4Q9NXW9 302 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 NLKQ9UBE8 527 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 N6AMT1Q9Y5N5 214 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 COL27A1Q8IZC6 1860 aaPredicted RBP16.69■□□□□ 0.26
HOXA9-201ENST00000343483 NOTOA8MTQ0 251 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 CD63P08962 238 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 CCL3P10147 92 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 DAP3P51398 398 aaKnown RBP16.69■□□□□ 0.26
HOXA9-201ENST00000343483 ZP4Q12836 540 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 UTS2BQ765I0 119 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 PPP1R32Q7Z5V6 425 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 FADS6Q8N9I5 356 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 CAPSLQ8WWF8 208 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 SLC7A6Q92536 515 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 RFT1Q96AA3 541 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 NUFIP1Q9UHK0 495 aaKnown RBP16.69■□□□□ 0.26
HOXA9-201ENST00000343483 KCNG2Q9UJ96 466 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 TMEM14AQ9Y6G1 99 aa16.69■□□□□ 0.26
HOXA9-201ENST00000343483 IGLV1-36A0A0B4J1U3 117 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 G3V3Y1 287 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 ZNF593O00488 134 aaPredicted RBP16.68■□□□□ 0.26
HOXA9-201ENST00000343483 GPRIN2O60269 458 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 FZD7O75084 574 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 ZFPL1O95159 310 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 FAM157BP0CG42 384 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 ALOX5APP20292 161 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 HSF1Q00613 529 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 ZFP69Q49AA0 526 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 RNF166Q96A37 237 aaPredicted RBP16.68■□□□□ 0.26
HOXA9-201ENST00000343483 DMRTB1Q96MA1 342 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 MNTQ99583 582 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 THAP7Q9BT49 309 aaPredicted RBP16.68■□□□□ 0.26
HOXA9-201ENST00000343483 EDEM2Q9BV94 578 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 MED29Q9NX70 200 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 A6NIZ1 184 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 UPK3AO75631 287 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 EPXP11678 715 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 ATF1P18846 271 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 RAP1BP61224 184 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 RAP1AP62834 184 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 TATDN3Q17R31 274 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 HSD17B12Q53GQ0 312 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 CEP78Q5JTW2 689 aa16.68■□□□□ 0.26
HOXA9-201ENST00000343483 LRRC69Q6ZNQ3 347 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms