RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 SSNA1O43805 119 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 EIF4E2O60573 245 aaKnown RBP9.31□□□□□ -0.92
LIMA1-201ENST00000341247 IFNGR1P15260 489 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 DCTDP32321 178 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 POU3F1Q03052 451 aaPredicted RBP9.31□□□□□ -0.92
LIMA1-201ENST00000341247 MFGE8Q08431 387 aaPredicted RBP9.31□□□□□ -0.92
LIMA1-201ENST00000341247 SGCBQ16585 318 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 GRINAQ7Z429 371 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 ANKRD37Q7Z713 158 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 OR11H7Q8NGC8 314 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 OTOSQ8NHW6 89 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 GIMAP1Q8WWP7 306 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 NXPE2Q96DL1 559 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 CHRNA10Q9GZZ6 450 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 CENPMQ9NSP4 180 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 ADAMTS9Q9P2N4 1935 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 TXNDC12O95881 172 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 PDGFBP01127 241 aaPredicted RBP9.31□□□□□ -0.92
LIMA1-201ENST00000341247 H2AFB2P0C5Z0 115 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 GZMKP49863 264 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 LRFN4Q6PJG9 635 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 EID2Q8N6I1 236 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 HAVCR2Q8TDQ0 301 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 S100A16Q96FQ6 103 aaKnown RBP9.31□□□□□ -0.92
LIMA1-201ENST00000341247 ZNF768Q9H5H4 540 aaKnown RBP9.31□□□□□ -0.92
LIMA1-201ENST00000341247 WNT16Q9UBV4 365 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 RALGAPA1Q6GYQ0 2036 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 IGKV1D-43A0A0B4J1Z2 117 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 PLPP3O14495 311 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 ALOX12BO75342 701 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 EFNB2P52799 333 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 EMP2P54851 167 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 FOXF1Q12946 379 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 CCDC92Q53HC0 331 aaPredicted RBP9.31□□□□□ -0.92
LIMA1-201ENST00000341247 TMEM71Q6P5X7 295 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 MAMSTRQ6ZN01 415 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 GPR148Q8TDV2 347 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 SMIM4Q8WVI0 70 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 DEDD2Q8WXF8 326 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 ADAMTS14Q8WXS8 1223 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 CCNL2Q96S94 520 aaPredicted RBP9.31□□□□□ -0.92
LIMA1-201ENST00000341247 OR51J1Q9H342 316 aa9.31□□□□□ -0.92
LIMA1-201ENST00000341247 URB1O60287 2271 aaKnown RBP9.31□□□□□ -0.92
LIMA1-201ENST00000341247 MASP2O00187 686 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 LYSMD4Q5XG99 296 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 RHBDD2Q6NTF9 364 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 NDUFAF7Q7L592 441 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 ZNF441Q8N8Z8 693 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 ZNF248Q8NDW4 579 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 CHIAQ9BZP6 476 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 CDCP1Q9H5V8 836 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 SLC22A23A1A5C7 686 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 TO15178 435 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 OR2J2O76002 312 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 KDM4BO94953 1096 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 HPXP02790 462 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 STOMP27105 288 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 VEGFCP49767 419 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 ART1P52961 327 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 KLF9Q13886 244 aaPredicted RBP9.3□□□□□ -0.92
LIMA1-201ENST00000341247 ST3GAL2Q16842 350 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 EMC4Q5J8M3 183 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 PRAMEF20Q5VT98 475 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 WDR74Q6RFH5 385 aaPredicted RBP9.3□□□□□ -0.92
LIMA1-201ENST00000341247 KCTD20Q7Z5Y7 419 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 DND1Q8IYX4 353 aaKnown RBP9.3□□□□□ -0.92
LIMA1-201ENST00000341247 TCTE3Q8IZS6 198 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 C4orf45Q96LM5 186 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 CRB3Q9BUF7 120 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 ABHD6Q9BV23 337 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 TXNIPQ9H3M7 391 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 ZCCHC4Q9H5U6 513 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 OCIAD1Q9NX40 245 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 RARRES3Q9UL19 164 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 FOXJ3Q9UPW0 622 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 PATE3B3GLJ2 98 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 NPIPA5E9PKD4 350 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 RGS13O14921 159 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 CELA2AP08217 269 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 ERP29P30040 261 aaKnown RBP9.3□□□□□ -0.92
LIMA1-201ENST00000341247 GUCA2AQ02747 115 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 TLE3Q04726 772 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 SLC17A1Q14916 467 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 SLC18B1Q6NT16 456 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 PRSS42Q7Z5A4 293 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 LRRTM1Q86UE6 522 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 GPAT4Q86UL3 456 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 OR10G3Q8NGC4 313 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 CCDC74BQ96LY2 380 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 DCBLD2Q96PD2 775 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 PCED1AQ9H1Q7 454 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 HRASLSQ9HDD0 168 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 CGGBP1Q9UFW8 167 aaPredicted RBP9.3□□□□□ -0.92
LIMA1-201ENST00000341247 NPIPA1Q9UND3 350 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 EMC9Q9Y3B6 208 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 TMEM14AQ9Y6G1 99 aa9.3□□□□□ -0.92
LIMA1-201ENST00000341247 LOC101059948A0A1B0GTJ6 334 aa9.29□□□□□ -0.92
LIMA1-201ENST00000341247 TEX51A0A1B0GUA7 166 aa9.29□□□□□ -0.92
LIMA1-201ENST00000341247 A0A1W2PNR3 127 aa9.29□□□□□ -0.92
LIMA1-201ENST00000341247 A0A1W2PQD3 144 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms