RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 LIPGQ9Y5X9 500 aa15.46■□□□□ 0.07
CLDN4-201ENST00000340958 A0A1B0GVG6 124 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 CCRL2O00421 344 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 SMAD9O15198 467 aaKnown RBP15.45■□□□□ 0.06
CLDN4-201ENST00000340958 AKAP8O43823 692 aaKnown RBP15.45■□□□□ 0.06
CLDN4-201ENST00000340958 CTLA4P16410 223 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 RGS6P49758 472 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 LINC00303Q3SY05 128 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 RNFT1Q5M7Z0 435 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 ZNF322Q6U7Q0 402 aaPredicted RBP15.45■□□□□ 0.06
CLDN4-201ENST00000340958 CREB3L2Q70SY1 520 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 SLC16A9Q7RTY1 509 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 ZBTB46Q86UZ6 589 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 OR6N2Q8NGY6 317 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 YIPF6Q96EC8 236 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 INTS14Q96SY0 518 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 SF3B5Q9BWJ5 86 aaKnown RBP15.45■□□□□ 0.06
CLDN4-201ENST00000340958 TTTY10Q9BZA0 68 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 PAQR5Q9NXK6 330 aaPredicted RBP15.45■□□□□ 0.06
CLDN4-201ENST00000340958 MCTS1Q9ULC4 181 aaKnown RBP15.45■□□□□ 0.06
CLDN4-201ENST00000340958 CAB39Q9Y376 341 aaPredicted RBP15.45■□□□□ 0.06
CLDN4-201ENST00000340958 ZNF670-ZNF695F2Z2N8 137 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 KHDRBS3O75525 346 aaKnown RBP15.45■□□□□ 0.06
CLDN4-201ENST00000340958 GPANK1O95872 356 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 SCG5P05408 212 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 ZNF708P17019 499 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 CLDN18P56856 261 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 FMODQ06828 376 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 MLLT11Q13015 90 aaPredicted RBP15.45■□□□□ 0.06
CLDN4-201ENST00000340958 SLC17A1Q14916 467 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 POU4F3Q15319 338 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 THEM4Q5T1C6 240 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 FCRLAQ7L513 359 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 NOXO1Q8NFA2 376 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 OR6N1Q8NGY5 312 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 OR52N1Q8NH53 320 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 C12orf43Q96C57 262 aaKnown RBP15.45■□□□□ 0.06
CLDN4-201ENST00000340958 ZDHHC11Q9H8X9 412 aa15.45■□□□□ 0.06
CLDN4-201ENST00000340958 COA3Q9Y2R0 106 aaPredicted RBP15.45■□□□□ 0.06
CLDN4-201ENST00000340958 PNMA8CA0A1B0GUJ8 204 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 J3QLW9 94 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 ZNF701M0R085 212 aaPredicted RBP15.44■□□□□ 0.06
CLDN4-201ENST00000340958 TFP02787 698 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 MT-ND5P03915 603 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 NR2C1P13056 603 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 ZNF19P17023 458 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 CD79BP40259 229 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 ACTA2P62736 377 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 ACTG2P63267 376 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 RASGEF1BQ0VAM2 473 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 ETFDHQ16134 617 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 BCL2A1Q16548 175 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 ASB18Q6ZVZ8 466 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 ANKRD13BQ86YJ7 626 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 KLBQ86Z14 1044 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 UFD1Q92890 307 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 PNPLA2Q96AD5 504 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 ZNF775Q96BV0 537 aaPredicted RBP15.44■□□□□ 0.06
CLDN4-201ENST00000340958 OPALINQ96PE5 141 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 ISG20L2Q9H9L3 353 aaKnown RBP15.44■□□□□ 0.06
CLDN4-201ENST00000340958 ENPP5Q9UJA9 477 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 LAMP5Q9UJQ1 280 aa15.44■□□□□ 0.06
CLDN4-201ENST00000340958 CENPBD1B2RD01 187 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 ZNF823P16415 610 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 LSM3P62310 102 aaKnown RBP15.43■□□□□ 0.06
CLDN4-201ENST00000340958 ADAM8P78325 824 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 ZNF85Q03923 595 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 LIPKQ5VXJ0 399 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 FNDC8Q8TC99 324 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 C4orf36Q96KX1 117 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 ARHGAP9Q9BRR9 750 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 WDR76Q9H967 626 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 CAMK2AQ9UQM7 478 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 IGLV1-36A0A0B4J1U3 117 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 H3BMQ9 156 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 ATXN7O15265 892 aaPredicted RBP15.43■□□□□ 0.06
CLDN4-201ENST00000340958 AIREO43918 545 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 SPARCP09486 303 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 FAM87AP0C7U9 286 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 PGA4P0DJD7 388 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 PGA3P0DJD8 388 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 CSNK1A1P48729 337 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 LY6DQ14210 128 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 C3AR1Q16581 482 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 WDFY1Q8IWB7 410 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 THEM6Q8WUY1 208 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 ZNF385AQ96PM9 386 aaKnown RBP15.43■□□□□ 0.06
CLDN4-201ENST00000340958 TRIM36Q9NQ86 728 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 BABAM2Q9NXR7 383 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 GNG8Q9UK08 70 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 TMEM14AQ9Y6G1 99 aa15.43■□□□□ 0.06
CLDN4-201ENST00000340958 LOC100506127A0A0U1RQW1 187 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 A0A1W2PPL8 197 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 ZNF593O00488 134 aaPredicted RBP15.42■□□□□ 0.06
CLDN4-201ENST00000340958 TGFBR2P37173 567 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 HSF2Q03933 536 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 NHLRC1Q6VVB1 395 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 GLB1L2Q8IW92 636 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 MCEMP1Q8IX19 187 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 TIGD4Q8IY51 512 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms