RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 RNASE6Q93091 150 aaKnown RBP19.49■□□□□ 0.71
SDC3-202ENST00000339394 PLEKHA8Q96JA3 519 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 PRRG3Q9BZD7 231 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 FN3KQ9H479 309 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 RERGLQ9H628 205 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 SRA1Q9HD15 236 aaKnown RBP19.49■□□□□ 0.71
SDC3-202ENST00000339394 FAM183AA6NL82 134 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 ZNF99A8MXY4 864 aaPredicted RBP19.49■□□□□ 0.71
SDC3-202ENST00000339394 M0R129 80 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 SLC16A6O15403 523 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 GRNP28799 593 aaKnown RBP19.49■□□□□ 0.71
SDC3-202ENST00000339394 GGT2P36268 569 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 PCYT1AP49585 367 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 AQP4P55087 323 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 EFNB1P98172 346 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 TGFBR3Q03167 851 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 PTP4A1Q93096 173 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 PITX2Q99697 317 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 GMPPBQ9Y5P6 360 aa19.49■□□□□ 0.71
SDC3-202ENST00000339394 H0YJX3 145 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 PSMB1P20618 241 aaKnown RBP19.48■□□□□ 0.71
SDC3-202ENST00000339394 CRABP1P29762 137 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 UGT2B10P36537 528 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 CDC42P60953 191 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 ARF1P84077 181 aaKnown RBP19.48■□□□□ 0.71
SDC3-202ENST00000339394 TCEANCQ8N8B7 351 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 ZNF555Q8NEP9 628 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 CYGBQ8WWM9 190 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 KISS1RQ969F8 398 aaPredicted RBP19.48■□□□□ 0.71
SDC3-202ENST00000339394 LRRC46Q96FV0 321 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 HCAR1Q9BXC0 346 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 HDHD5Q9BXW7 423 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 NMNAT2Q9BZQ4 307 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 B9D1Q9UPM9 204 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 DOPEY1Q5JWR5 2465 aa19.48■□□□□ 0.71
SDC3-202ENST00000339394 CIB4A0PJX0 185 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 C16orf97H3BN30 126 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 TLX2O43763 284 aaPredicted RBP19.47■□□□□ 0.71
SDC3-202ENST00000339394 RAD51DO75771 328 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 VHLP40337 213 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 STK11Q15831 433 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 PLBD1Q6P4A8 553 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 ZBTB46Q86UZ6 589 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 DHRSXQ8N5I4 330 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 OR9Q1Q8NGQ5 310 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 FAM81AQ8TBF8 368 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 UBE2FQ969M7 185 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 OTULINQ96BN8 352 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 IL4I1Q96RQ9 567 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 FOXB1Q99853 325 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 ADI1Q9BV57 179 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 MED20Q9H944 212 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 HINT3Q9NQE9 182 aaKnown RBP19.47■□□□□ 0.71
SDC3-202ENST00000339394 UGT2A1Q9Y4X1 527 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 FKBP7Q9Y680 259 aa19.47■□□□□ 0.71
SDC3-202ENST00000339394 PRR23D1E9PI22 279 aaPredicted RBP19.46■□□□□ 0.71
SDC3-202ENST00000339394 SEC14L2O76054 403 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 PRR23D2P0DMB1 279 aaPredicted RBP19.46■□□□□ 0.71
SDC3-202ENST00000339394 CLUP10909 449 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 PAICSP22234 425 aaKnown RBP19.46■□□□□ 0.71
SDC3-202ENST00000339394 CCKARP32238 428 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 ZNF84P51523 738 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 SLC25A1P53007 311 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 SH3BGRP55822 239 aaPredicted RBP19.46■□□□□ 0.71
SDC3-202ENST00000339394 ADARB1P78563 741 aaKnown RBP19.46■□□□□ 0.71
SDC3-202ENST00000339394 KEAP1Q14145 624 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 SNCBQ16143 134 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 GABRA6Q16445 453 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 DNM1P34Q6PK57 102 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 BHLHA15Q7RTS1 189 aaPredicted RBP19.46■□□□□ 0.71
SDC3-202ENST00000339394 CPOQ8IVL8 374 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 MUS81Q96NY9 551 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 IMPAD1Q9NX62 359 aa19.46■□□□□ 0.71
SDC3-202ENST00000339394 COA3Q9Y2R0 106 aaPredicted RBP19.46■□□□□ 0.71
SDC3-202ENST00000339394 IGLV1-36A0A0B4J1U3 117 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 FAM171A2A8MVW0 826 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 KHDRBS3O75525 346 aaKnown RBP19.45■□□□□ 0.7
SDC3-202ENST00000339394 GYPBP06028 91 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 CDAP32320 146 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 TTC23Q5W5X9 447 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 OR7E24Q6IFN5 339 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 IZUMO2Q6UXV1 221 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 ZNF627Q7L945 461 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 OR8J1Q8NGP2 316 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 OR1K1Q8NGR3 316 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 OR2T4Q8NH00 348 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 TMEM163Q8TC26 289 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 ZNRF4Q8WWF5 429 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 FOXN4Q96NZ1 517 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 RACGAP1Q9H0H5 632 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 RASSF4Q9H2L5 321 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 NPDC1Q9NQX5 325 aaPredicted RBP19.45■□□□□ 0.7
SDC3-202ENST00000339394 TMEM38BQ9NVV0 291 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 LRRK2Q5S007 2527 aa19.45■□□□□ 0.7
SDC3-202ENST00000339394 A0A096LPE4 126 aa19.44■□□□□ 0.7
SDC3-202ENST00000339394 A0A1W2PPZ6 126 aa19.44■□□□□ 0.7
SDC3-202ENST00000339394 CLIC3O95833 236 aa19.44■□□□□ 0.7
SDC3-202ENST00000339394 B4GALT1P15291 398 aa19.44■□□□□ 0.7
SDC3-202ENST00000339394 SPI1P17947 270 aa19.44■□□□□ 0.7
SDC3-202ENST00000339394 IL32P24001 234 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms