RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 CD79AP11912 226 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 CALB2P22676 271 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 SLC9A3P48764 834 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 CTXN1P60606 82 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 RPL27P61353 136 aaKnown RBP13.22□□□□□ -0.29
PRKN-201ENST00000338468 FMODQ06828 376 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 TAF11Q15544 211 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 SWI5Q1ZZU3 235 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 ANKDD1AQ495B1 522 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 FGD3Q5JSP0 725 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 C10orf128Q5T292 105 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 SLC22A24Q8N4F4 322 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 ZNF519Q8TB69 540 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 NANOS1Q8WY41 292 aaKnown RBP13.22□□□□□ -0.29
PRKN-201ENST00000338468 TRMT61AQ96FX7 289 aaKnown RBP13.22□□□□□ -0.29
PRKN-201ENST00000338468 GPA33Q99795 319 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 SH3GL3Q99963 347 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 CACNG6Q9BXT2 260 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 CA10Q9NS85 328 aa13.22□□□□□ -0.29
PRKN-201ENST00000338468 SH3PXD2BA1X283 911 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 OR8G3PP0DMU2 310 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 GIPRP48546 466 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 FXYD6P3P58550 94 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 RAB1AP62820 205 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 MS4A2Q01362 244 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 ADIPOQQ15848 244 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 ZBED5Q49AG3 693 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 SLC25A47Q6Q0C1 308 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 CYP2R1Q6VVX0 501 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 DNM1P46Q6ZS02 220 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 HDDC2Q7Z4H3 204 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 ZNF584Q8IVC4 421 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 NUP37Q8NFH4 326 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 OR4K5Q8NGD3 323 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 OR52J3Q8NH60 311 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 NABP1Q96AH0 204 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 BDH2Q9BUT1 245 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 IL1RAPQ9NPH3 570 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 TAS2R1Q9NYW7 299 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 ACTR3BQ9P1U1 418 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 STX18Q9P2W9 335 aaKnown RBP13.21□□□□□ -0.29
PRKN-201ENST00000338468 SIGLEC7Q9Y286 467 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 TMEM5Q9Y2B1 443 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 ADAM18Q9Y3Q7 739 aa13.21□□□□□ -0.29
PRKN-201ENST00000338468 ARFGEF3Q5TH69 2177 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 TCRBV5S2A0A599 114 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 SMAD7O15105 426 aaKnown RBP13.2□□□□□ -0.3
PRKN-201ENST00000338468 PDE5AO76074 875 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 UBL3O95164 117 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 ZNF35P13682 527 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 ITGA2P17301 1181 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 CDAP32320 146 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 ACVR1BP36896 505 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 PTDSS1P48651 473 aaKnown RBP13.2□□□□□ -0.3
PRKN-201ENST00000338468 ERVK-25P63136 954 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 RAB39AQ14964 217 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 MSMPQ1L6U9 139 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 NRN1LQ496H8 165 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 THSD4Q6ZMP0 1018 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 FAM122BQ7Z309 247 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 ZER1Q7Z7L7 766 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 CDK20Q8IZL9 346 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 ARHGAP24Q8N264 748 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 OR4F15Q8NGB8 312 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 BCAS4Q8TDM0 211 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 KCNS3Q9BQ31 491 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 ALG12Q9BV10 488 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 DENND2DQ9H6A0 471 aaPredicted RBP13.2□□□□□ -0.3
PRKN-201ENST00000338468 SMURF2Q9HAU4 748 aa13.2□□□□□ -0.3
PRKN-201ENST00000338468 INAFM1C9JVW0 142 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 H7C417 338 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 GADD45GO95257 159 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 FABP3P05413 133 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 CD14P08571 375 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 MMP7P09237 267 aaPredicted RBP13.19□□□□□ -0.3
PRKN-201ENST00000338468 OR4A8P0C604 315 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 THBS4P35443 961 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 SERPINF1P36955 418 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 ZNF84P51523 738 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 MRPS34P82930 218 aaKnown RBP13.19□□□□□ -0.3
PRKN-201ENST00000338468 SPIBQ01892 262 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 CD47Q08722 323 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 TNK1Q13470 666 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 CLEC12BQ2HXU8 276 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 MESTQ5EB52 335 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 LCN8Q6JVE9 175 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 VHLLQ6RSH7 139 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 RRM2BQ7LG56 351 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 TRPM8Q7Z2W7 1104 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 ARIH2OSQ8N7S6 290 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 IL17RDQ8NFM7 739 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 NSMAFQ92636 917 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 FBXO17Q96EF6 278 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 CLPTM1LQ96KA5 538 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 Q96M85 177 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 C1orf21Q9H246 121 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 RTTNQ86VV8 2226 aa13.19□□□□□ -0.3
PRKN-201ENST00000338468 FBN1P35555 2871 aaKnown RBP13.18□□□□□ -0.3
PRKN-201ENST00000338468 TMEM129A0AVI4 362 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms