RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 FLNCQ14315 2725 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 DOPEY1Q5JWR5 2465 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 MPDZO75970 2070 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 A0A096LPE4 126 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 A0A1W2PPZ6 126 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 RIIAD1A6NNX1 92 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 GPR37O15354 613 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC16A7O60669 478 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 MITFO75030 526 aaPredicted RBP10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 OR8G3PP0DMU2 310 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 NPR2P20594 1047 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 COL8A1P27658 744 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 ALDH3A2P51648 485 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 PPP2R2BQ00005 443 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 CDK5Q00535 292 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 PPA1Q15181 289 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 SGCAQ16586 387 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 PGGHGQ32M88 737 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 TBRG1Q3YBR2 411 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 ALKBH2Q6NS38 261 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 LEG1Q6P5S2 330 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 ZNF627Q7L945 461 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 WFDC8Q8IUA0 241 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 CBR4Q8N4T8 237 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 OR4Q3Q8NH05 313 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 NMD3Q96D46 503 aaKnown RBP10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 ZNF837Q96EG3 531 aaPredicted RBP10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 ZC3HAV1LQ96H79 300 aaKnown RBP10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 PLEKHA8Q96JA3 519 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 NMNAT3Q96T66 252 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 PRRG3Q9BZD7 231 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 SYT4Q9H2B2 425 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 RERGLQ9H628 205 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 SEC61A2Q9H9S3 476 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 MOV10Q9HCE1 1003 aaKnown RBP10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 SRA1Q9HD15 236 aaKnown RBP10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 C8orf4Q9NR00 106 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 USE1Q9NZ43 259 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 CRIM1Q9NZV1 1036 aa10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 INTS1Q8N201 2190 aaKnown RBP10.45□□□□□ -0.74
SPTLC1-202ENST00000337841 USP9XQ93008 2570 aaPredicted RBP10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 H7C1C5 153 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 EI24O14681 340 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC2A10O95528 541 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 ALPLP05186 524 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 ZNF3P17036 446 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 PAICSP22234 425 aaKnown RBP10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 CENPAP49450 140 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 LCN6P62502 163 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 MRPS34P82930 218 aaKnown RBP10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 FMODQ06828 376 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 NPRL3Q12980 569 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 DAZAP2Q15038 168 aaPredicted RBP10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 PTGES3Q15185 160 aaKnown RBP10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 TRIP10Q15642 601 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 TAB1Q15750 504 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 NRN1LQ496H8 165 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 HIKESHIQ53FT3 197 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 ACSM5Q6NUN0 579 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 PTCHD4Q6ZW05 846 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 DPPA2Q7Z7J5 298 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 IQCF1Q8N6M8 205 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 WDR31Q8NA23 367 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 NPEPL1Q8NDH3 523 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 OR52N5Q8NH56 324 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 NANOS1Q8WY41 292 aaKnown RBP10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC38A2Q96QD8 506 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 NUAK2Q9H093 628 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 SIAEQ9HAT2 523 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC25A19Q9HC21 320 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 CMC2Q9NRP2 79 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 TMEM38BQ9NVV0 291 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 TMEFF2Q9UIK5 374 aaPredicted RBP10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 B9D1Q9UPM9 204 aa10.44□□□□□ -0.74
SPTLC1-202ENST00000337841 ARPC4-TTLL3A0A0A6YYG9 625 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 A0A1W2PPL8 197 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 OR6C68A6NDL8 312 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 THBDP07204 575 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 B4GALT1P15291 398 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 LAP3P28838 519 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 CCKARP32238 428 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 CAPZA2P47755 286 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC34A1Q06495 639 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 SNAPC1Q16533 368 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 ZNF362Q5T0B9 420 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 TMEM236Q5W0B7 351 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 GLB1L2Q8IW92 636 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC22A24Q8N4F4 322 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC37A3Q8NCC5 494 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 SDR9C7Q8NEX9 313 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 OR2T4Q8NH00 348 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC29A1Q99808 456 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 RIBC2Q9H4K1 309 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 RPRD1BQ9NQG5 326 aaKnown RBP10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 TVP23BQ9NYZ1 205 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 COA3Q9Y2R0 106 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC25A15Q9Y619 301 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 FKBP7Q9Y680 259 aa10.43□□□□□ -0.74
SPTLC1-202ENST00000337841 SPTBN1Q01082 2364 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms