RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 GLCCI1Q86VQ1 547 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 LRP11Q86VZ4 500 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 WDFY1Q8IWB7 410 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 RFLNBQ8N5W9 214 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 OR4K5Q8NGD3 323 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 SYNPRQ8TBG9 265 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 SNX33Q8WV41 574 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 TAMM41Q96BW9 452 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 ZNF75AQ96N20 296 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 SOX7Q9BT81 388 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 ZNF416Q9BWM5 594 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 PCDHAC1Q9H158 963 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 ZNF385DQ9H6B1 395 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 NANOGQ9H9S0 305 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 SLCO1C1Q9NYB5 712 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 ZNF224Q9NZL3 707 aa9.16□□□□□ -0.94
CAPN3-202ENST00000337571 STX18Q9P2W9 335 aaKnown RBP9.16□□□□□ -0.94
CAPN3-202ENST00000337571 TPD52L2O43399 206 aaKnown RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 PPIHO43447 177 aaKnown RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 EDF1O60869 148 aaKnown RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 NPPAP01160 153 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 HPXP02790 462 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 MT-ND1P03886 318 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 F13BP05160 661 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 IGFBP1P08833 259 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 ASAH2BP0C7U1 165 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 FAM157BP0CG42 384 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 PGA4P0DJD7 388 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 PGA3P0DJD8 388 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 ANPEPP15144 967 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 APLNRP35414 380 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 RBM34P42696 430 aaKnown RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 GUCA1AP43080 201 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 UCP2P55851 309 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 KLF3P57682 345 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 MAD2L1BPQ15013 274 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 PCGF3Q3KNV8 242 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 ALKBH6Q3KRA9 238 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 NRN1LQ496H8 165 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 ELFN2Q5R3F8 820 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 NANOGP8Q6NSW7 305 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 UNQ6126/PRO20091Q6UXV3 157 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 CCDC80Q76M96 950 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 CARM1Q86X55 608 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 LRRC18Q8N456 261 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 SYT14Q8NB59 555 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 ICA1LQ8NDH6 482 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 RBM15BQ8NDT2 890 aaKnown RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 OR4D11Q8NGI4 311 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 FGFBP3Q8TAT2 258 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 ZNF519Q8TB69 540 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 MCHR2Q969V1 340 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 LRRC58Q96CX6 371 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 BCL2L14Q9BZR8 327 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 POLR2J2Q9GZM3 115 aaKnown RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 POLR2J3Q9H1A7 115 aaKnown RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 OR51B6Q9H340 312 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 NARFLQ9H6Q4 476 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 CCNB1IP1Q9NPC3 277 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 INIPQ9NRY2 104 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 DECR2Q9NUI1 292 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 ARGLU1Q9NWB6 273 aaPredicted RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 TAAR3PQ9P1P4 343 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 EIF3KQ9UBQ5 218 aaKnown RBP9.15□□□□□ -0.94
CAPN3-202ENST00000337571 RIMS3Q9UJD0 308 aa9.15□□□□□ -0.94
CAPN3-202ENST00000337571 CENPBD1B2RD01 187 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 ATP8B1O43520 1251 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 OR7A10O76100 309 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 LYPD3O95274 346 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 TFP02787 698 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 THY1P04216 161 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 SAGP10523 405 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-202ENST00000337571 NR2C1P13056 603 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 CCL2P13500 99 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 ACADSP16219 412 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 CCNOP22674 350 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 MRPS11P82912 194 aaKnown RBP9.14□□□□□ -0.95
CAPN3-202ENST00000337571 MYBPC1Q00872 1141 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 SRSF2Q01130 221 aaKnown RBP9.14□□□□□ -0.95
CAPN3-202ENST00000337571 TEKQ02763 1124 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 HSF2Q03933 536 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 RPL18Q07020 188 aaKnown RBP9.14□□□□□ -0.95
CAPN3-202ENST00000337571 ERICH5Q6P6B1 374 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 SHQ1Q6PI26 577 aaKnown RBP9.14□□□□□ -0.95
CAPN3-202ENST00000337571 DEF8Q6ZN54 512 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 RINLQ6ZS11 566 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF584Q8IVC4 421 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 PCYOX1LQ8NBM8 494 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 TMEM239Q8WW34 195 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 SGTBQ96EQ0 304 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 C1orf159Q96HA4 380 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF347Q96SE7 839 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 PRSS27Q9BQR3 290 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 ZNF426Q9BUY5 554 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 VIPAS39Q9H9C1 493 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 MEPEQ9NQ76 525 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-202ENST00000337571 HINT3Q9NQE9 182 aaKnown RBP9.14□□□□□ -0.95
CAPN3-202ENST00000337571 GID8Q9NWU2 228 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 MED31Q9Y3C7 131 aa9.14□□□□□ -0.95
CAPN3-202ENST00000337571 GRIP1Q9Y3R0 1128 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms