RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 LIME1Q9H400 295 aa13.79□□□□□ -0.2
MRPL55-202ENST00000336300 SIAEQ9HAT2 523 aa13.79□□□□□ -0.2
MRPL55-202ENST00000336300 FAIMQ9NVQ4 179 aa13.79□□□□□ -0.2
MRPL55-202ENST00000336300 DNAJB9Q9UBS3 223 aa13.79□□□□□ -0.2
MRPL55-202ENST00000336300 PLEKHA6Q9Y2H5 1048 aa13.79□□□□□ -0.2
MRPL55-202ENST00000336300 TEX15Q9BXT5 2789 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 CSMD2Q7Z408 3487 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 CSMD1Q96PZ7 3565 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 TEX13CA0A0J9YWL9 993 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 PRSS37A4D1T9 235 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 IDH3BO43837 385 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 DEAF1O75398 565 aaPredicted RBP13.78□□□□□ -0.2
MRPL55-202ENST00000336300 SLC2A10O95528 541 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 PLAUP00749 431 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 IGKV3-15P01624 115 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 ZNF26P17031 533 aaPredicted RBP13.78□□□□□ -0.2
MRPL55-202ENST00000336300 ERFP50548 548 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 CDH11P55287 796 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 RAB1AP62820 205 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 PIGFQ07326 219 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 COX10Q12887 443 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 KRR1Q13601 381 aaKnown RBP13.78□□□□□ -0.2
MRPL55-202ENST00000336300 TMEM53Q6P2H8 277 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 THSD4Q6ZMP0 1018 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 ZNF620Q6ZNG0 422 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 RASSF6Q6ZTQ3 369 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 SLC16A14Q7RTX9 510 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 FAM122BQ7Z309 247 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 MDP1Q86V88 176 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 JAZF1Q86VZ6 243 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 C10orf67Q8IYJ2 551 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 ZNF611Q8N823 705 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 GTPBP3Q969Y2 492 aaKnown RBP13.78□□□□□ -0.2
MRPL55-202ENST00000336300 SAMD8Q96LT4 415 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 DGCR6LQ9BY27 220 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 RNF121Q9H920 327 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 SEC61A2Q9H9S3 476 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 ZNF556Q9HAH1 456 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 CISD1Q9NZ45 108 aaKnown RBP13.78□□□□□ -0.2
MRPL55-202ENST00000336300 CRNNQ9UBG3 495 aaPredicted RBP13.78□□□□□ -0.2
MRPL55-202ENST00000336300 ITGB1BP2Q9UKP3 347 aa13.78□□□□□ -0.2
MRPL55-202ENST00000336300 IGHV1-18A0A0C4DH31 117 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 ARRDC5A6NEK1 342 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 VSTM5A8MXK1 200 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 SOCS2O14508 198 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 MAST4O15021 2626 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 ARPC3O15145 178 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 TXNDC12O95881 172 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 PTHP01270 115 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 HLA-HP01893 362 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 PTDSS1P48651 473 aaKnown RBP13.77□□□□□ -0.21
MRPL55-202ENST00000336300 MRPS34P82930 218 aaKnown RBP13.77□□□□□ -0.21
MRPL55-202ENST00000336300 NPRL3Q12980 569 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 SGCAQ16586 387 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 ZNF770Q6IQ21 691 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-202ENST00000336300 DNM1P34Q6PK57 102 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 SLC25A47Q6Q0C1 308 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 SKA3Q8IX90 412 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 KBTBD8Q8NFY9 601 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 CCL19Q99731 98 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 VNN3Q9NY84 501 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 B3GNT2Q9NY97 397 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 PDP1Q9P0J1 537 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-202ENST00000336300 AP4S1Q9Y587 144 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 ATP23Q9Y6H3 246 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 CDH10Q9Y6N8 788 aa13.77□□□□□ -0.21
MRPL55-202ENST00000336300 SPG11Q96JI7 2443 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 HRNRQ86YZ3 2850 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-202ENST00000336300 ANKRD17O75179 2603 aaKnown RBP13.76□□□□□ -0.21
MRPL55-202ENST00000336300 SLC22A23A1A5C7 686 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 SHISA9B4DS77 424 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 TMCC2O75069 709 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 ATE1O95260 518 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 PPP1R3DO95685 299 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 RENP00797 406 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 IGLV1-44P01699 117 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 FCGR1AP12314 374 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 CRABP1P29762 137 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 GIPRP48546 466 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 IDH3GP51553 393 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-202ENST00000336300 IST1P53990 364 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 FXYD6P3P58550 94 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 PLP2Q04941 152 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 FMODQ06828 376 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 MESTQ5EB52 335 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 LRRC18Q8N456 261 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 CLDN22Q8N7P3 220 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 SMAP2Q8WU79 429 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-202ENST00000336300 TMEM171Q8WVE6 324 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 SLCO4A1Q96BD0 722 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 RASD2Q96D21 266 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 NMD3Q96D46 503 aaKnown RBP13.76□□□□□ -0.21
MRPL55-202ENST00000336300 MBD6Q96DN6 1003 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 NRBF2Q96F24 287 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 RAB3IPQ96QF0 476 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-202ENST00000336300 FEVQ99581 238 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 SH3GL3Q99963 347 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 BDH2Q9BUT1 245 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 EGLN3Q9H6Z9 239 aa13.76□□□□□ -0.21
MRPL55-202ENST00000336300 CCNB1IP1Q9NPC3 277 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms