RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 HGDQ93099 445 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 INTS12Q96CB8 462 aaKnown RBP11.31□□□□□ -0.6
LIMK1-201ENST00000336180 ABHD1Q96SE0 405 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 USB1Q9BQ65 265 aaKnown RBP11.31□□□□□ -0.6
LIMK1-201ENST00000336180 HAO2Q9NYQ3 351 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 COQ3Q9NZJ6 369 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 B9D1Q9UPM9 204 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 HS3ST3B1Q9Y662 390 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 TRABD2BA6NFA1 517 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 MS4A18H0YCH9 400 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 KIR2DL3P43628 341 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 ZNF41P51814 821 aaPredicted RBP11.3□□□□□ -0.6
LIMK1-201ENST00000336180 RPL27P61353 136 aaKnown RBP11.3□□□□□ -0.6
LIMK1-201ENST00000336180 RPS15P62841 145 aaKnown RBP11.3□□□□□ -0.6
LIMK1-201ENST00000336180 ACSM1Q08AH1 577 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 C17orf67Q0P5P2 114 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 PCOLCEQ15113 449 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 MS4A18Q3C1V0 323 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 FAM198BQ6UWH4 519 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 POMGNT2Q8NAT1 580 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 DTWD2Q8NBA8 298 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 GFI1Q99684 422 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 MED18Q9BUE0 208 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 SEC61A2Q9H9S3 476 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 MRPS18BQ9Y676 258 aaKnown RBP11.3□□□□□ -0.6
LIMK1-201ENST00000336180 TRAV8-7A0A075B6U6 113 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 A0A0G2JMM0 328 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 A0A1W2PPB8 328 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 A0A1W2PRS3 328 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 PRSS37A4D1T9 235 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 VSTM2BA6NLU5 285 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 KIR3DP1A8MWS1 328 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 STMND1H3BQB6 276 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 M0R296 226 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 LMX1BO60663 402 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 KLF7O75840 302 aaPredicted RBP11.3□□□□□ -0.6
LIMK1-201ENST00000336180 CER1O95813 267 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 KRT8P05787 483 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 ATF4P18848 351 aaPredicted RBP11.3□□□□□ -0.6
LIMK1-201ENST00000336180 BIDP55957 195 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 PPP3R1P63098 170 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 MFGE8Q08431 387 aaPredicted RBP11.3□□□□□ -0.6
LIMK1-201ENST00000336180 MYBPHQ13203 477 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 MRPL14Q6P1L8 145 aaKnown RBP11.3□□□□□ -0.6
LIMK1-201ENST00000336180 LINC00299Q6ZSB3 139 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 FAM220AQ7Z4H9 259 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 UBQLNLQ8IYU4 475 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 CARFQ8N187 725 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 MRPL39Q9NYK5 338 aaKnown RBP11.3□□□□□ -0.6
LIMK1-201ENST00000336180 NPIPA5E9PKD4 350 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 FLRT2O43155 660 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 TMIGD3P0DMS9 266 aaPredicted RBP11.3□□□□□ -0.6
LIMK1-201ENST00000336180 SLC2A1P11166 492 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 TCN2P20062 427 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 PTGDSP41222 190 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 CASP3P42574 277 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 BLVRAP53004 296 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 SCN1BQ07699 218 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 POU4F2Q12837 409 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 MFAP5Q13361 173 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 SLC16A9Q7RTY1 509 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 FAM181AQ8N9Y4 354 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 OR4K17Q8NGC6 315 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 POC1BQ8TC44 478 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 AUNIPQ9H7T9 357 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 NPIPA1Q9UND3 350 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
LIMK1-201ENST00000336180 OR6C76A6NM76 312 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 TRIM77I1YAP6 450 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 UPK3AO75631 287 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 ANKRD34CP0C6C1 535 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 DNASE1L1P49184 302 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 MTNR1BP49286 362 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 ACTA2P62736 377 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 ACTG2P63267 376 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 DGCR2P98153 550 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 PUDPQ08623 228 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 EIF2B1Q14232 305 aaKnown RBP11.29□□□□□ -0.6
LIMK1-201ENST00000336180 SGCBQ16585 318 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 XKRXQ6PP77 449 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 GVINP1Q7Z2Y8 2422 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 TIPARPQ7Z3E1 657 aaKnown RBP11.29□□□□□ -0.6
LIMK1-201ENST00000336180 PRSS35Q8N3Z0 413 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 TMEM156Q8N614 296 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 IL17RDQ8NFM7 739 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 PPP1R3EQ9H7J1 279 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 EMC7Q9NPA0 242 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 NUFIP1Q9UHK0 495 aaKnown RBP11.29□□□□□ -0.6
LIMK1-201ENST00000336180 A0A1W2PQD3 144 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 ISPDA4D126 451 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 TOX3O15405 576 aaPredicted RBP11.29□□□□□ -0.6
LIMK1-201ENST00000336180 STK17BO94768 372 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 GUSBP08236 651 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 ZSWIM7Q19AV6 140 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 GFOD2Q3B7J2 385 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 EEF1A1P5Q5VTE0 462 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 HBMQ6B0K9 141 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 LRFN4Q6PJG9 635 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 ZNF517Q6ZMY9 492 aaPredicted RBP11.29□□□□□ -0.6
LIMK1-201ENST00000336180 FCRLAQ7L513 359 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms