RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 FAM50BQ9Y247 325 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 AMDHD2Q9Y303 409 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 NRXN3Q9Y4C0 1643 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 IGHV2-70DA0A0C4DH43 119 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 CXCL11O14625 94 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 TLX2O43763 284 aaPredicted RBP7.87□□□□□ -1.15
TDP1-201ENST00000335725 TRBC1P01850 177 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 FGF5P12034 268 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 RAB28P51157 221 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 SPOCK1Q08629 439 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 FZD5Q13467 585 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 QRICH1Q2TAL8 776 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 ALG10BQ5I7T1 473 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 UBE2NLQ5JXB2 153 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 BTNL8Q6UX41 500 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 ADCK2Q7Z695 626 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 NRMQ8IXM6 262 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 KDM8Q8N371 416 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 GBGT1Q8N5D6 347 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 FBXO22Q8NEZ5 403 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 STEAP2Q8NFT2 490 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 OR56A1Q8NGH5 318 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 ADAMTS17Q8TE56 1095 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 ERGIC1Q969X5 290 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 ATOH8Q96SQ7 321 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 SPATC1LQ9H0A9 340 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 CUTCQ9NTM9 273 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 TAS2R8Q9NYW2 309 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 WRAP73Q9P2S5 460 aaPredicted RBP7.87□□□□□ -1.15
TDP1-201ENST00000335725 CORO2BQ9UQ03 480 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 PSG11Q9UQ72 335 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 DSPPQ9NZW4 1301 aa7.87□□□□□ -1.15
TDP1-201ENST00000335725 GXYLT2A0PJZ3 443 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 HEPACAM2A8MVW5 462 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 PCDH7O60245 1069 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 SLC35G6P0C7Q6 338 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 ZNF10P21506 573 aaPredicted RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 KHKP50053 298 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 MMP16P51512 607 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 BACE1P56817 501 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 GAS6Q14393 721 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 RPE65Q16518 533 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 FBLN7Q53RD9 439 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 CEACAM20Q6UY09 585 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 OR4K17Q8NGC6 315 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 OR10W1Q8NGF6 305 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 OR1P1Q8NH06 330 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 OR52I2Q8NH67 350 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 CASTOR1Q8WTX7 329 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 DPF1Q92782 380 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 ADIPOR1Q96A54 375 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 TMEM159Q96B96 161 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 POFUT1Q9H488 388 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 TMEM38AQ9H6F2 299 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 RDH14Q9HBH5 336 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 ASIC5Q9NY37 505 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 MRPS18BQ9Y676 258 aaKnown RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 MYO18AQ92614 2054 aaKnown RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 CLEC18AA5D8T8 446 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 YJEFN3A6XGL0 299 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 M0QZ24 198 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 TSPAN15O95858 294 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 SNAI1O95863 264 aaPredicted RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 CST3P01034 146 aaPredicted RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 CSF1P09603 554 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 GTF2F2P13984 249 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 GPX2P18283 190 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 NPY4RP50391 375 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 METAP1P53582 386 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 BTG2P78543 158 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 ATXN7L3Q14CW9 347 aaPredicted RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 ELOBQ15370 118 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 PSG3Q16557 428 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 FAM98CQ17RN3 349 aaKnown RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 LDLRAD2Q5SZI1 272 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 GPC2Q8N158 579 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 CLEC18CQ8NCF0 446 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 OR51F2Q8NH61 342 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 FRZBQ92765 325 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 FBXO32Q969P5 355 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 ARRDC3Q96B67 414 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 APOLD1Q96LR9 279 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 LYSMD1Q96S90 227 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 NKX3-1Q99801 234 aaPredicted RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 ANGPTL4Q9BY76 406 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 MFRPQ9BY79 579 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 ZNF552Q9H707 407 aaPredicted RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 TVP23BQ9NYZ1 205 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 USP36Q9P275 1121 aaKnown RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 NOD1Q9Y239 953 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 ENPP4Q9Y6X5 453 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 GBF1Q92538 1859 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 IGLV3-22A0A075B6J6 115 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 CDIPTO14735 213 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 ZNF208O43345 1280 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 LTN1O94822 1766 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 WISP3O95389 354 aaPredicted RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 CRYGCP07315 174 aa7.86□□□□□ -1.15
TDP1-201ENST00000335725 PPIBP23284 216 aaKnown RBP7.86□□□□□ -1.15
TDP1-201ENST00000335725 SNCAP37840 140 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms