RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 PAX7P23759 505 aa12.9□□□□□ -0.34
KATNA1-201ENST00000335643 THBS4P35443 961 aa12.9□□□□□ -0.34
KATNA1-201ENST00000335643 RPL27P61353 136 aaKnown RBP12.9□□□□□ -0.34
KATNA1-201ENST00000335643 LCN6P62502 163 aa12.9□□□□□ -0.34
KATNA1-201ENST00000335643 RAB39AQ14964 217 aa12.9□□□□□ -0.34
KATNA1-201ENST00000335643 C10orf128Q5T292 105 aa12.9□□□□□ -0.34
KATNA1-201ENST00000335643 KRT80Q6KB66 452 aa12.9□□□□□ -0.34
KATNA1-201ENST00000335643 NUP37Q8NFH4 326 aa12.9□□□□□ -0.34
KATNA1-201ENST00000335643 NABP1Q96AH0 204 aa12.9□□□□□ -0.34
KATNA1-201ENST00000335643 KCNS3Q9BQ31 491 aa12.9□□□□□ -0.34
KATNA1-201ENST00000335643 IL20RAQ9UHF4 553 aa12.9□□□□□ -0.34
KATNA1-201ENST00000335643 C2CD3Q4AC94 2353 aa12.9□□□□□ -0.34
KATNA1-201ENST00000335643 HTR3EA5X5Y0 456 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 CENPBD1B2RD01 187 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 H7C417 338 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 SSX4O60224 188 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 GMNNO75496 209 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 PDE5AO76074 875 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 UBL3O95164 117 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 OR4A8P0C604 315 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 ZNF35P13682 527 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 SLC9A3P48764 834 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 ERVK-25P63136 954 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 CD47Q08722 323 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 THSD4Q6ZMP0 1018 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 LRRC18Q8N456 261 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 PAQR4Q8N4S7 273 aaPredicted RBP12.9□□□□□ -0.35
KATNA1-201ENST00000335643 NSMAFQ92636 917 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 BDH2Q9BUT1 245 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 MOV10Q9HCE1 1003 aaKnown RBP12.9□□□□□ -0.35
KATNA1-201ENST00000335643 NDE1Q9NXR1 346 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 SIGLEC7Q9Y286 467 aa12.9□□□□□ -0.35
KATNA1-201ENST00000335643 FAM32AQ9Y421 112 aaKnown RBP12.9□□□□□ -0.35
KATNA1-201ENST00000335643 TLN2Q9Y4G6 2542 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 TCRBV5S2A0A599 114 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 RNF223E7ERA6 249 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 IMPA2O14732 288 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 GPRIN2O60269 458 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 PTP4A3O75365 173 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 LY6G6DO95868 133 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 CCL2P13500 99 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 SERPINF1P36955 418 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 MS4A2Q01362 244 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 ZBED5Q49AG3 693 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 MESTQ5EB52 335 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 SLC25A47Q6Q0C1 308 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 FAM122BQ7Z309 247 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 BIVMQ86UB2 503 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 NANOS1Q8WY41 292 aaKnown RBP12.89□□□□□ -0.35
KATNA1-201ENST00000335643 CLPTM1LQ96KA5 538 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 Q96M85 177 aa12.89□□□□□ -0.35
KATNA1-201ENST00000335643 TMEM129A0AVI4 362 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 SH3PXD2BA1X283 911 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 RAB36O95755 333 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 SCG5P05408 212 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 FABP3P05413 133 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 IGFBP1P08833 259 aaPredicted RBP12.88□□□□□ -0.35
KATNA1-201ENST00000335643 MMP7P09237 267 aaPredicted RBP12.88□□□□□ -0.35
KATNA1-201ENST00000335643 CALB2P22676 271 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 SPIBQ01892 262 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 SNTB2Q13425 540 aaKnown RBP12.88□□□□□ -0.35
KATNA1-201ENST00000335643 DAG1Q14118 895 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 TAF11Q15544 211 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 ETFDHQ16134 617 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 RRM2BQ7LG56 351 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 SLC16A14Q7RTX9 510 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 HDDC2Q7Z4H3 204 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 ZER1Q7Z7L7 766 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 CDK20Q8IZL9 346 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 ZCCHC24Q8N2G6 241 aaKnown RBP12.88□□□□□ -0.35
KATNA1-201ENST00000335643 ZNF525Q8N782 197 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 OR4F15Q8NGB8 312 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 RASD2Q96D21 266 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 RSRC1Q96IZ7 334 aaKnown RBP12.88□□□□□ -0.35
KATNA1-201ENST00000335643 SORCS2Q96PQ0 1159 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 PLK3Q9H4B4 646 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 ZNF442Q9H7R0 627 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 IL1RAPQ9NPH3 570 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 TAS2R1Q9NYW7 299 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 ACTR3BQ9P1U1 418 aa12.88□□□□□ -0.35
KATNA1-201ENST00000335643 IGHV4-30-2A0A087WSY4 118 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 MGRN1O60291 552 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 GADD45GO95257 159 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 SERPINA5P05154 406 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 CD14P08571 375 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 NR4A1P22736 598 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 RRM2P31350 389 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 RPL4P36578 427 aaKnown RBP12.87□□□□□ -0.35
KATNA1-201ENST00000335643 ZNF84P51523 738 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 MNAT1P51948 309 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 NUDT6P53370 316 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 MRPS34P82930 218 aaKnown RBP12.87□□□□□ -0.35
KATNA1-201ENST00000335643 KRTAP1-1Q07627 177 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 DBPQ10586 325 aaPredicted RBP12.87□□□□□ -0.35
KATNA1-201ENST00000335643 RAB35Q15286 201 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 EFNB3Q15768 340 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 ANKDD1AQ495B1 522 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 SPATS1Q496A3 300 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 NRN1LQ496H8 165 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 CLEC9AQ6UXN8 241 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms